Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 AL359837.1-201ENST00000381357 287 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 RNU1-73P-201ENST00000383971 164 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 MIR23B-201ENST00000384832 97 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 Y_RNA.579-201ENST00000390939 94 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 SNORD56-201ENST00000413522 71 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AC016831.2-201ENST00000417179 352 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 PGBD4P6-201ENST00000421501 610 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 HMGN2P30-201ENST00000423237 256 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 MTCO2P12-201ENST00000427426 682 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 RPL23AP22-201ENST00000437556 453 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 MTCYBP6-201ENST00000441810 138 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AL590664.1-201ENST00000448065 339 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 HMGN2P7-201ENST00000456186 273 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 ELOCP24-201ENST00000456370 334 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AC006445.2-201ENST00000510061 472 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AC109479.2-201ENST00000517842 174 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 LINC00933-203ENST00000559812 219 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 CYCSP39-201ENST00000565821 309 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AC093249.1-201ENST00000567049 203 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AC123912.5-201ENST00000605470 343 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AC064836.2-201ENST00000609491 462 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AL161423.1-201ENST00000613700 262 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AC073476.4-201ENST00000628409 72 ntBASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHA13Q9Y5I0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AF117829.1-206ENST00000621883 3802 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-37P-201ENST00000362692 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-11P-201ENST00000364234 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-7-201ENST00000364784 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 SNORA62.3-201ENST00000365110 153 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-8-201ENST00000365467 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 SNORD42.2-201ENST00000365570 69 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-25P-201ENST00000383873 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-1-201ENST00000383898 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 Y_RNA.394-201ENST00000383942 103 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-48P-201ENST00000384161 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-36P-201ENST00000384172 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-4P-201ENST00000384205 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-5P-201ENST00000384238 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-3P-201ENST00000384314 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-16P-201ENST00000384385 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-15P-201ENST00000384534 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-2-201ENST00000384627 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-29P-201ENST00000384637 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-9-201ENST00000384776 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-33P-201ENST00000384793 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 SNORD73A-201ENST00000386062 65 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AL159987.2-201ENST00000432754 307 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 SNORD105B-201ENST00000458770 79 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 SNORD5.1-201ENST00000458800 75 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 Y_RNA.639-201ENST00000458981 102 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 SNORA84-201ENST00000459229 133 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-1183P-201ENST00000517054 60 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AC023632.4-201ENST00000517783 191 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 HSPE1P7-201ENST00000604681 321 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AC018462.2-201ENST00000605375 395 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AC124303.1-201ENST00000605703 360 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-6P-201ENST00000606623 107 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 AL138880.2-201ENST00000616214 239 ntBASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHA13Q9Y5I0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 RNA5SP197-201ENST00000363357 119 ntBASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-884P-201ENST00000363889 107 ntBASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 RNU6-1106P-201ENST00000390845 107 ntBASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 AL445529.1-201ENST00000398713 389 ntBASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 RPL5P18-201ENST00000406671 891 ntBASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 AL353729.1-201ENST00000425044 720 ntBASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 NOTCH2P1-201ENST00000443481 624 ntBASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 RPL37P4-201ENST00000448908 268 ntBASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 Y_RNA.653-201ENST00000459091 95 ntBASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 AC005741.1-201ENST00000511094 432 ntBASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 AC026782.1-201ENST00000512952 449 ntBASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.59□□□□□ -1.83
PCDHA13Q9Y5I0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms