Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 AL391001.1-201ENST00000602747 715 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 AC009314.1-201ENST00000603871 304 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 SCARNA4-202ENST00000625402 129 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-944P-201ENST00000364023 107 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 RNA5SP160-201ENST00000364866 120 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 SNORA48.3-201ENST00000391081 134 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 HMGB1P11-201ENST00000413899 637 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AL627311.1-201ENST00000431514 115 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 HMGB3P12-201ENST00000438745 556 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AC025750.2-201ENST00000442609 450 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AL358794.1-201ENST00000445689 381 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AP000936.2-201ENST00000447151 681 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 snoU13.9-201ENST00000458927 103 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 S100A11P2-201ENST00000467589 312 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AC114801.2-201ENST00000503825 781 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 SNORA19.3-201ENST00000516165 130 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 MTCYBP20-201ENST00000524239 1129 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AP004247.1-201ENST00000531556 1289 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 GTF3AP2-201ENST00000557014 266 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 MIR5007-201ENST00000583098 95 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AC005000.2-201ENST00000605468 310 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 MIR15A-201ENST00000607334 83 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AC024940.5-201ENST00000622889 474 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AL356596.1-201ENST00000624230 379 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AC006386.2-201ENST00000624491 75 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AC012005.1-201ENST00000624575 75 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AP000720.1-201ENST00000625091 483 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 AC013437.2-201ENST00000639587 677 ntBASIC1.53□□□□□ -2.16
CHTOPQ9Y3Y2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
CHTOPQ9Y3Y2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 OR4G2P-201ENST00000328113 903 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 RNU6-72P-201ENST00000384285 79 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 SNORD116-20-201ENST00000384529 92 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 RNA5SP390-201ENST00000410191 113 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 RNA5SP425-201ENST00000410336 112 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 MTATP6P20-201ENST00000414147 562 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 ARL5AP4-201ENST00000430731 512 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 RPL7P36-201ENST00000444633 681 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AL035666.1-201ENST00000446195 348 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 RPL23AP35-201ENST00000451906 501 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 snoU13.14-201ENST00000459372 104 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AL049829.1-201ENST00000465411 156 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 BZW1P2-201ENST00000473537 826 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 MTCYBP40-201ENST00000509390 1135 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AC091163.3-201ENST00000518269 1144 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 TRAV32-201ENST00000553993 340 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AC007375.1-201ENST00000554513 578 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AL353778.1-201ENST00000603149 408 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AC103810.6-201ENST00000606708 136 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AL136981.2-201ENST00000617319 734 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 U6.42-201ENST00000618440 107 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AC006386.1-201ENST00000619436 415 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AC009831.4-201ENST00000620744 325 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 MIR6132-201ENST00000622083 109 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 AC002543.1-201ENST00000299783 1954 ntBASIC1.52□□□□□ -2.17
CHTOPQ9Y3Y2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 U3.12-201ENST00000364498 214 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 MIR518C-201ENST00000384822 101 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AL035407.1-201ENST00000429211 571 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 CBX3P6-201ENST00000430257 527 ntBASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.51□□□□□ -2.17
CHTOPQ9Y3Y2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms