Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 SNORA31.17-201ENST00000516953 127 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 CYCSP23-201ENST00000519781 313 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 NACAP3-201ENST00000552100 481 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 LSM6P2-201ENST00000552208 177 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 LINC00557-201ENST00000563184 1279 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 BNIP3P16-201ENST00000589779 534 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 BNIP3P27-201ENST00000599991 412 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 AC112220.3-201ENST00000605502 502 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 AC138393.1-203ENST00000327086 343 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 RNU6-37P-201ENST00000362692 107 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 RNU6-11P-201ENST00000364234 107 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 RNU1-133P-201ENST00000364867 167 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 RNU6-921P-201ENST00000384361 107 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 MIR598-201ENST00000384868 97 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 BEND7P1-201ENST00000422058 457 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 TPRKBP1-201ENST00000456243 481 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 RNU6-1132P-201ENST00000459214 107 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 BET1P1-201ENST00000482276 359 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 RNU6-667P-201ENST00000517186 102 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 ADAM3B-201ENST00000569937 840 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AC009229.3-201ENST00000608056 282 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AC016542.1-201ENST00000608259 493 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AC040896.1-201ENST00000613819 479 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 AC243829.3-201ENST00000622177 108 ntBASIC0.3□□□□□ -2.36
UBE2D4Q9Y2X8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 RNU1-58P-201ENST00000362413 163 ntBASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 RNA5SP499-201ENST00000363982 119 ntBASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 RNU6-16P-201ENST00000384385 107 ntBASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 MIR10B-201ENST00000385011 110 ntBASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 RNA5SP121-201ENST00000516537 101 ntBASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 RNA5SP291-201ENST00000517222 105 ntBASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 AL031176.1-201ENST00000604554 466 ntBASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 MIR6513-201ENST00000621188 64 ntBASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 MTND5P11-201ENST00000511037 1812 ntBASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 AL442644.1-201ENST00000454390 3105 ntBASIC0.29□□□□□ -2.36
UBE2D4Q9Y2X8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 RNY1-201ENST00000364228 113 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 Y_RNA.355-201ENST00000365462 98 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 MIR216A-201ENST00000385063 110 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 MIR613-201ENST00000385248 95 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 NDUFS5P4-201ENST00000412983 318 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 RPS26P5-201ENST00000418544 335 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 AC092634.6-201ENST00000418558 192 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 EIF1P1-201ENST00000421436 341 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 AC015724.1-201ENST00000478577 156 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 TRBVA-201ENST00000498804 316 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 AC093767.1-201ENST00000504523 156 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 AC067942.3-201ENST00000512025 362 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 AC022483.1-201ENST00000514020 567 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 SNORA25.11-201ENST00000515935 105 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 MIR3167-201ENST00000579623 85 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 VN1R82P-201ENST00000601481 356 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 AC091152.3-201ENST00000604227 325 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 AC006270.3-201ENST00000605967 1036 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 AC095038.3-201ENST00000634439 195 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.28□□□□□ -2.36
UBE2D4Q9Y2X8 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.37
UBE2D4Q9Y2X8 RNU6-942P-201ENST00000363002 107 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 MIR605-201ENST00000385078 83 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 MIR1262-201ENST00000408276 93 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 RNU2-47P-201ENST00000410649 186 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AC114482.1-201ENST00000418010 247 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 RPP40P1-201ENST00000426762 456 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AC244023.1-201ENST00000426884 112 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 MTCYBP32-201ENST00000427945 1084 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AL596276.1-201ENST00000434465 418 ntBASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.27□□□□□ -2.37
UBE2D4Q9Y2X8 RPL36AP48-201ENST00000485521 314 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms