Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL442663.2-201ENST00000554385 511 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AC012119.1-201ENST00000603184 222 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AC098826.3-201ENST00000603823 466 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AL512643.1-201ENST00000635735 524 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 MTND5P27-201ENST00000428871 1720 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AL513302.2-201ENST00000562313 1842 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 AC068647.1-201ENST00000489539 2265 ntBASIC3.58□□□□□ -1.84
SSX2IPQ9Y2D8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-512P-201ENST00000364438 103 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 RPS4XP7-201ENST00000406274 780 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 MIR1302-11-201ENST00000408051 138 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 MIR1302-9-201ENST00000408365 138 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 MIR1302-10-201ENST00000408734 138 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 RPL21P90-201ENST00000415692 466 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 MTCO2P27-201ENST00000420740 428 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AL592045.1-201ENST00000429867 352 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AL353743.1-202ENST00000431724 1695 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 HIGD1AP11-201ENST00000438361 280 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 RPS26P21-201ENST00000475397 348 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 RPL7P43-201ENST00000478876 753 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AL160314.1-201ENST00000490836 438 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 RN7SL504P-201ENST00000494496 287 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 TBCAP3-201ENST00000512475 312 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 SNORA70.16-201ENST00000516390 95 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-1256P-201ENST00000516539 103 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 RNA5SP468-201ENST00000516782 93 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 RNA5SP471-201ENST00000516971 106 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AC007151.1-201ENST00000572774 483 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 MIR4790-201ENST00000577799 79 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 MIR548AC-201ENST00000585049 88 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 MIR5692C1-201ENST00000585309 91 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 POLR3GP2-201ENST00000588366 668 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AL161798.1-201ENST00000604630 131 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AL133255.1-201ENST00000606374 441 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 MIR1302-2-201ENST00000607096 138 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AC064836.2-201ENST00000609491 462 ntBASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SSX2IPQ9Y2D8 AC002546.1-201ENST00000588041 2504 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 FAM35CP-201ENST00000554755 2470 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 AC008568.2-201ENST00000623862 2313 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-50P-201ENST00000362356 103 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 Y_RNA.315-201ENST00000365117 102 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 SNORA4.3-201ENST00000365564 137 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 DEFB109C-201ENST00000382575 264 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 DEFB109B-201ENST00000382656 264 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-128P-201ENST00000383976 107 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-1297P-201ENST00000384415 104 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 UBA52P6-201ENST00000399822 382 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 MIR548F5-201ENST00000408421 86 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 RNA5SP129-201ENST00000410276 118 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 AC063979.1-201ENST00000415539 377 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 Z85995.1-201ENST00000415547 335 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 Z75741.1-201ENST00000446793 314 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 SNORD19B-201ENST00000459623 84 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 MTND4P17-201ENST00000470444 350 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 AC021205.2-201ENST00000480069 347 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 AC009901.1-201ENST00000506703 541 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 RNU6-559P-201ENST00000516151 98 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 RNA5SP291-201ENST00000517222 105 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 HIGD1AP1-201ENST00000550979 275 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 MIR1273C-201ENST00000578669 77 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 AL133393.1-201ENST00000603277 287 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 AL162274.2-201ENST00000614406 332 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 AL138726.1-201ENST00000614873 333 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 AC126177.8-201ENST00000618339 1015 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 Z99571.1-201ENST00000636677 394 ntBASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SSX2IPQ9Y2D8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AC017071.1-201ENST00000564407 2204 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 RNA5SP374-201ENST00000362939 125 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 SNORD116-11-201ENST00000383882 92 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 Y_RNA.419-201ENST00000384041 102 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AL360182.1-201ENST00000397433 468 ntBASIC3.55□□□□□ -1.84
SSX2IPQ9Y2D8 AL357075.1-201ENST00000404107 726 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms