Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AL136380.1-201ENST00000447970 162 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 GAPDHP17-201ENST00000449858 1001 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AL021397.1-201ENST00000451806 248 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 SNORA59A-201ENST00000459326 152 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AC008413.1-201ENST00000511864 177 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 RNU5F-8P-201ENST00000515941 111 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 SCARNA17.1-201ENST00000516211 143 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 SCARNA17.2-201ENST00000516334 143 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 Vault.3-201ENST00000516676 95 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AC090572.1-201ENST00000519251 160 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AP003072.2-201ENST00000527756 676 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 MIR3935-201ENST00000583472 104 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 RPS15AP11-201ENST00000594193 385 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AC073544.2-201ENST00000601155 540 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 CLIC4P2-201ENST00000601934 717 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AL391813.1-201ENST00000603098 260 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AL590229.1-201ENST00000603497 542 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 Z99497.2-201ENST00000603634 310 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AC090578.1-201ENST00000604955 591 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AC135507.1-201ENST00000607214 561 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 SCARNA17.4-201ENST00000614296 143 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 MIR3974-201ENST00000637126 96 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC103710.2-202ENST00000641454 2853 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 RNY4P34-201ENST00000364779 95 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 RNU2-39P-201ENST00000410604 198 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 OR51A5P-201ENST00000415429 942 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC009518.2-201ENST00000418056 731 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC090960.1-201ENST00000421072 306 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AL353706.1-201ENST00000436728 494 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC073614.1-201ENST00000438690 650 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 OSTCP8-201ENST00000445117 448 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC010486.3-201ENST00000511602 785 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 SCARNA24.1-201ENST00000516465 137 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 Y_RNA.689-201ENST00000516589 107 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 BTF3P12-201ENST00000519620 469 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AL157871.3-201ENST00000557231 293 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC007151.1-201ENST00000572774 483 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 MIR1273C-201ENST00000578669 77 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 MIR4513-201ENST00000581077 86 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 NRBF2P1-201ENST00000587407 859 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AL022154.1-201ENST00000604698 785 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC005332.10-201ENST00000612725 619 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 MIR6134-201ENST00000617606 109 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 AC098657.3-201ENST00000620434 263 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 MTND5P6-201ENST00000422338 1798 ntBASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRAPPC4Q9Y296 TEX21P-201ENST00000447107 1476 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 CDC27P3-201ENST00000635418 1910 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 RNY1P12-201ENST00000364251 105 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 SNORA24.1-201ENST00000384401 135 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 SNORA40C-201ENST00000391285 128 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 RNA5SP508-201ENST00000411327 119 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC127391.1-201ENST00000411737 98 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC114491.1-201ENST00000416095 246 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 MTND2P4-201ENST00000445034 1004 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC003071.1-201ENST00000451219 789 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC117522.1-201ENST00000509821 380 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC108078.2-201ENST00000510750 236 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC022447.1-201ENST00000515358 464 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC087883.1-201ENST00000551882 391 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC091152.3-201ENST00000604227 325 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AC064872.1-201ENST00000604823 1072 ntBASIC1.96□□□□□ -2.1
TRAPPC4Q9Y296 AL139286.2-201ENST00000606838 396 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms