Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC092809.3-201ENST00000415453 231 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AL589872.1-201ENST00000426602 288 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 FABP5P14-201ENST00000437273 393 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 SNORA59A-201ENST00000459326 152 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 MTND1P3-201ENST00000484956 952 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 RPL39P36-201ENST00000490784 156 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 RNU2-10P-201ENST00000516375 211 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 SNORA31.25-201ENST00000517242 134 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AC106038.2-201ENST00000520706 568 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 IGKV3-31-201ENST00000523109 329 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AC011979.2-201ENST00000527568 352 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AC118273.2-201ENST00000532092 465 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 MIR4287-201ENST00000579398 78 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 BNIP3P9-201ENST00000603714 553 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AL358072.1-201ENST00000604156 575 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AC104763.2-201ENST00000604179 382 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AC007363.1-201ENST00000604736 620 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AL589994.2-201ENST00000621124 579 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 MIR6852-201ENST00000621699 66 ntBASIC2.37□□□□□ -2.03
SMC3Q9UQE7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMC3Q9UQE7 AL359854.1-201ENST00000614203 1594 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AC008555.8-201ENST00000623602 2168 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 NACAP2-201ENST00000318548 624 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 RNU6-511P-201ENST00000363496 107 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 RNU4-1-201ENST00000363925 141 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 XGY1-201ENST00000381172 446 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 RNU6-658P-201ENST00000384606 106 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 RNU6-297P-201ENST00000384636 107 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 GSTA9P-201ENST00000406231 611 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AL030996.1-201ENST00000411430 235 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 MYL8P-204ENST00000431574 518 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 MTND1P30-201ENST00000441241 901 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 SSXP1-201ENST00000453640 473 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AC068781.1-201ENST00000488231 618 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AC008526.1-201ENST00000509149 338 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AC009063.1-201ENST00000563342 702 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 MIR4529-201ENST00000578110 78 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 MIR4672-201ENST00000583126 81 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 NRBF2P1-201ENST00000587407 859 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 CLIC4P2-201ENST00000601934 717 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AC025811.1-201ENST00000604312 472 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AL359999.1-201ENST00000604513 294 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AC092354.1-201ENST00000606057 376 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AC103710.2-201ENST00000609912 942 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 AL603755.1-201ENST00000619504 163 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.36□□□□□ -2.03
SMC3Q9UQE7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMC3Q9UQE7 HSPE1P11-201ENST00000339579 310 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 RNU5E-1-201ENST00000362477 120 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 RNU6-486P-201ENST00000363116 107 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 RNU6-288P-201ENST00000363690 104 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 RNU5E-6P-201ENST00000365574 115 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AL023284.1-201ENST00000403956 276 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 MIR1302-8-201ENST00000408342 128 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 RPS12P24-201ENST00000412619 387 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AL592045.1-201ENST00000429867 352 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.35□□□□□ -2.03
SMC3Q9UQE7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.35□□□□□ -2.03
SMC3Q9UQE7 MTND1P12-201ENST00000455231 147 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 UBE2DNL-203ENST00000474922 222 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AC139453.3-201ENST00000493276 369 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
SMC3Q9UQE7 RNU6-1092P-201ENST00000516955 87 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.35□□□□□ -2.03
SMC3Q9UQE7 MIR3167-201ENST00000579623 85 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AL109918.3-201ENST00000603072 338 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AC073114.1-201ENST00000612027 490 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AL365204.3-201ENST00000612448 685 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AC005296.1-201ENST00000616145 209 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 U4atac.1-201ENST00000618345 95 ntBASIC2.35□□□□□ -2.03
SMC3Q9UQE7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SMC3Q9UQE7 AC103710.2-202ENST00000641454 2853 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms