Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 RPL31P12-201ENST00000422587 358 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 HMGB1P18-201ENST00000438801 619 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 RNA5SP310-201ENST00000459084 116 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 RNU7-180P-201ENST00000459240 63 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 AC091885.1-201ENST00000506658 268 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 AC010265.1-201ENST00000513509 211 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 SCGB1D5P-201ENST00000515134 247 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 Y_RNA.691-201ENST00000516611 103 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 RN7SKP256-201ENST00000517201 314 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 TRAV37-201ENST00000553906 342 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 AL442663.2-201ENST00000554385 511 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 AC026464.5-201ENST00000562497 722 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 MIR4424-201ENST00000585257 86 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 MIR622-201ENST00000638396 96 ntBASIC3.62□□□□□ -1.83
SCAF8Q9UPN6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 UBE2L2-201ENST00000254302 429 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 MIR30E-201ENST00000362104 92 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 Y_RNA.100-201ENST00000363141 102 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 SNORA63-201ENST00000363450 132 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 Y_RNA.245-201ENST00000364493 95 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 RNU6-522P-201ENST00000364497 107 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 Y_RNA.474-201ENST00000384341 102 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AC005534.2-201ENST00000431047 433 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AL591704.1-201ENST00000432574 275 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AL590664.1-201ENST00000448065 339 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 RPL23AP11-201ENST00000475260 469 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 RPS15AP34-201ENST00000487776 387 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AC117522.3-201ENST00000507974 584 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 RPL7P20-201ENST00000520308 745 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 RANP3-201ENST00000530970 276 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AC098826.3-201ENST00000603823 466 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AL161798.1-201ENST00000604630 131 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AC104237.2-201ENST00000612456 443 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AC012409.4-201ENST00000612923 249 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 AC011155.2-201ENST00000623202 216 ntBASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SCAF8Q9UPN6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 SNORD115-7-201ENST00000365306 82 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 Y_RNA.373-201ENST00000365600 103 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 MIR301A-201ENST00000385261 86 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 OR6C66P-201ENST00000414917 930 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 HSPE1P1-201ENST00000421494 318 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 NUP35P1-201ENST00000422734 947 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 AC093106.2-201ENST00000428212 385 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 SAR1AP4-201ENST00000429225 591 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 AL591212.2-201ENST00000433923 257 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 AL512844.2-201ENST00000433990 593 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 PPP1R2P5-201ENST00000457256 603 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 TRBV1-201ENST00000476502 284 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 FAM206BP-201ENST00000510179 541 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 Y_RNA.689-201ENST00000516589 107 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 RNU6-685P-201ENST00000517088 95 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 RNA5SP290-201ENST00000517133 127 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 CASP1P1-201ENST00000526345 212 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 ELOCP29-201ENST00000588193 334 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 AC022432.1-201ENST00000595739 310 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 AC113139.1-201ENST00000605049 239 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 AC022893.3-201ENST00000607665 437 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 AL133216.2-202ENST00000634512 349 ntBASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCAF8Q9UPN6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCAF8Q9UPN6 Y_RNA.431-201ENST00000384086 102 ntBASIC3.59□□□□□ -1.83
SCAF8Q9UPN6 AL139397.2-201ENST00000404529 772 ntBASIC3.59□□□□□ -1.83
SCAF8Q9UPN6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.59□□□□□ -1.83
SCAF8Q9UPN6 MTCO2P12-201ENST00000427426 682 ntBASIC3.59□□□□□ -1.83
SCAF8Q9UPN6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.59□□□□□ -1.83
SCAF8Q9UPN6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.59□□□□□ -1.83
SCAF8Q9UPN6 HMGB3P11-201ENST00000440127 604 ntBASIC3.59□□□□□ -1.83
SCAF8Q9UPN6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SCAF8Q9UPN6 FABP5P13-201ENST00000452144 328 ntBASIC3.59□□□□□ -1.83
SCAF8Q9UPN6 SNRPFP3-201ENST00000457792 225 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms