Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 RNU1-86P-201ENST00000516108 154 ntBASIC3.38□□□□□ -1.87
AMFRQ9UKV5 RNU1-107P-201ENST00000516617 154 ntBASIC3.38□□□□□ -1.87
AMFRQ9UKV5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.38□□□□□ -1.87
AMFRQ9UKV5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.38□□□□□ -1.87
AMFRQ9UKV5 TRAV37-201ENST00000553906 342 ntBASIC3.38□□□□□ -1.87
AMFRQ9UKV5 AL121821.2-201ENST00000556081 394 ntBASIC3.38□□□□□ -1.87
AMFRQ9UKV5 MIR3158-1-201ENST00000583596 81 ntBASIC3.38□□□□□ -1.87
AMFRQ9UKV5 AL133215.3-201ENST00000609801 448 ntBASIC3.38□□□□□ -1.87
AMFRQ9UKV5 AC099778.2-201ENST00000610904 211 ntBASIC3.38□□□□□ -1.87
AMFRQ9UKV5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
AMFRQ9UKV5 AC006133.1-201ENST00000617106 264 ntBASIC3.38□□□□□ -1.87
AMFRQ9UKV5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.38□□□□□ -1.87
AMFRQ9UKV5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.38□□□□□ -1.87
AMFRQ9UKV5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.38□□□□□ -1.87
AMFRQ9UKV5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
AMFRQ9UKV5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.38□□□□□ -1.87
AMFRQ9UKV5 AL049781.1-201ENST00000623195 3585 ntBASIC3.38□□□□□ -1.87
AMFRQ9UKV5 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.38□□□□□ -1.87
AMFRQ9UKV5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
AMFRQ9UKV5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.37□□□□□ -1.87
AMFRQ9UKV5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
AMFRQ9UKV5 AC007785.2-201ENST00000598627 1916 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 MTND5P27-201ENST00000428871 1720 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 Y_RNA.132-201ENST00000363421 102 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 Y_RNA.315-201ENST00000365117 102 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 RNU6-395P-201ENST00000365662 106 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 U3.42-201ENST00000408746 214 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 RNA5SP129-201ENST00000410276 118 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 AC245054.2-201ENST00000415639 319 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 HMGB1P9-201ENST00000429856 646 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 AL359672.1-201ENST00000442302 409 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 HMGN2P16-201ENST00000456802 261 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 AC130509.1-201ENST00000464158 433 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.37□□□□□ -1.87
AMFRQ9UKV5 RPL21P13-201ENST00000488305 481 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 AC139453.3-201ENST00000493276 369 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.37□□□□□ -1.87
AMFRQ9UKV5 HMGB3P15-201ENST00000507326 574 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 SNORA67.7-201ENST00000516664 135 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 HIGD1AP1-201ENST00000550979 275 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 AL163153.1-201ENST00000554223 283 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 TRAV28-201ENST00000557548 323 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 MIR1254-2-201ENST00000579553 63 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 NUTF2P8-201ENST00000604593 363 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 AC124303.1-201ENST00000605703 360 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 PLCE1P1-201ENST00000622094 305 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.37□□□□□ -1.87
AMFRQ9UKV5 AC005183.1-201ENST00000603687 1979 ntBASIC3.37□□□□□ -1.87
AMFRQ9UKV5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.37□□□□□ -1.87
AMFRQ9UKV5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
AMFRQ9UKV5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AF117829.1-206ENST00000621883 3802 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 Z83843.1-201ENST00000604070 3685 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 RNU6-50P-201ENST00000362356 103 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 SNORA63-201ENST00000363450 132 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 Y_RNA.482-201ENST00000384377 111 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 RNU6-95P-201ENST00000384697 107 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 MIR200C-201ENST00000384980 68 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 MIR325-201ENST00000385260 98 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 RN7SKP27-201ENST00000410684 333 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 MYL8P-204ENST00000431574 518 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 UQCRHP3-201ENST00000451503 251 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 RN7SL75P-201ENST00000461926 281 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC027575.1-201ENST00000481064 460 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC092436.3-201ENST00000511788 257 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC026403.1-201ENST00000518938 295 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC009902.1-201ENST00000519351 183 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AP003072.1-201ENST00000531740 145 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC026371.1-201ENST00000551867 419 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 RNU6-85P-201ENST00000605989 107 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 MIR6128-201ENST00000615528 109 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC090971.5-201ENST00000621102 293 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AL136164.4-201ENST00000625013 2135 ntBASIC3.36□□□□□ -1.87
AMFRQ9UKV5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.36□□□□□ -1.87
AMFRQ9UKV5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
AMFRQ9UKV5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.35□□□□□ -1.87
AMFRQ9UKV5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.35□□□□□ -1.87
AMFRQ9UKV5 AC093831.2-201ENST00000624393 3427 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms