Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNU2-63P-201ENST00000410792 194 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 UBE2V1P4-201ENST00000425374 344 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AC244023.1-201ENST00000426884 112 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.42□□□□□ -2.34
SCN11AQ9UI33 TRBVB-201ENST00000477100 408 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AC145146.1-201ENST00000496370 254 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SCN11AQ9UI33 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AC233702.2-202ENST00000562547 291 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AC242498.1-201ENST00000604134 111 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AL138963.2-201ENST00000605137 226 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AC007349.4-201ENST00000608114 532 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AC243994.1-201ENST00000618627 109 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AC055876.5-201ENST00000605667 259 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 uc_338.17-201ENST00000619633 179 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 AC007792.1-201ENST00000623023 402 ntBASIC0.42□□□□□ -2.34
SCN11AQ9UI33 Y_RNA.62-201ENST00000362840 99 ntBASIC0.41□□□□□ -2.34
SCN11AQ9UI33 MIR506-201ENST00000384998 124 ntBASIC0.41□□□□□ -2.34
SCN11AQ9UI33 RPS25P9-201ENST00000435591 252 ntBASIC0.41□□□□□ -2.34
SCN11AQ9UI33 snoU13.9-201ENST00000458927 103 ntBASIC0.41□□□□□ -2.34
SCN11AQ9UI33 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN11AQ9UI33 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.41□□□□□ -2.34
SCN11AQ9UI33 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.41□□□□□ -2.34
SCN11AQ9UI33 MIR4765-201ENST00000585007 77 ntBASIC0.41□□□□□ -2.34
SCN11AQ9UI33 RNU6-750P-201ENST00000390946 107 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 USP9YP26-201ENST00000421008 661 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 USP9YP18-201ENST00000425912 695 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AL606489.2-201ENST00000433886 234 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 USP9YP24-201ENST00000434374 697 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AL161788.1-201ENST00000441805 169 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 USP9YP17-201ENST00000444617 696 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 PGBD4P5-201ENST00000445958 426 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 MRPS17P3-201ENST00000465453 385 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AC087477.1-201ENST00000465747 340 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AC006512.1-201ENST00000468816 291 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AL590705.4-201ENST00000532209 134 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AC096720.1-201ENST00000604441 183 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AL137246.1-201ENST00000607072 977 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 MIR1283-2-201ENST00000408621 87 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.4□□□□□ -2.35
SCN11AQ9UI33 MTND2P9-201ENST00000422293 931 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AL035410.1-201ENST00000427409 427 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.4□□□□□ -2.35
SCN11AQ9UI33 KATNBL1P6-201ENST00000453433 915 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AP003034.1-201ENST00000534621 422 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AL391261.3-201ENST00000557194 520 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 MTCO2P2-201ENST00000591258 225 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AC008121.1-201ENST00000603244 268 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AC004492.1-201ENST00000607036 742 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AC092953.2-201ENST00000608000 699 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 AC099654.5-201ENST00000636479 350 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 MTND2P41-201ENST00000637599 773 ntBASIC0.4□□□□□ -2.35
SCN11AQ9UI33 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SCN11AQ9UI33 AL031577.2-201ENST00000404133 280 ntBASIC0.39□□□□□ -2.35
SCN11AQ9UI33 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN11AQ9UI33 NCOR1P3-201ENST00000420479 303 ntBASIC0.39□□□□□ -2.35
SCN11AQ9UI33 ZNF863P-201ENST00000426746 417 ntBASIC0.39□□□□□ -2.35
SCN11AQ9UI33 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.39□□□□□ -2.35
SCN11AQ9UI33 AP000403.1-201ENST00000603349 851 ntBASIC0.39□□□□□ -2.35
SCN11AQ9UI33 AC097463.2-201ENST00000421074 142 ntBASIC0.38□□□□□ -2.35
SCN11AQ9UI33 AC010099.3-201ENST00000423896 409 ntBASIC0.38□□□□□ -2.35
SCN11AQ9UI33 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.38□□□□□ -2.35
SCN11AQ9UI33 FABP5P14-201ENST00000437273 393 ntBASIC0.38□□□□□ -2.35
SCN11AQ9UI33 MTCO2P20-201ENST00000437339 673 ntBASIC0.38□□□□□ -2.35
SCN11AQ9UI33 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.38□□□□□ -2.35
SCN11AQ9UI33 RNU4-77P-201ENST00000516692 156 ntBASIC0.38□□□□□ -2.35
SCN11AQ9UI33 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.38□□□□□ -2.35
SCN11AQ9UI33 AC073544.2-201ENST00000601155 540 ntBASIC0.38□□□□□ -2.35
SCN11AQ9UI33 AC008498.1-201ENST00000613012 531 ntBASIC0.38□□□□□ -2.35
SCN11AQ9UI33 uc_338.14-201ENST00000613162 166 ntBASIC0.38□□□□□ -2.35
SCN11AQ9UI33 RNU6-1226P-201ENST00000384317 107 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 RNU2-64P-201ENST00000411315 191 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.37□□□□□ -2.35
SCN11AQ9UI33 AC114982.1-201ENST00000469402 321 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.37□□□□□ -2.35
SCN11AQ9UI33 DUXAP1-201ENST00000556632 463 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 AC010615.3-201ENST00000597319 394 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.37□□□□□ -2.35
SCN11AQ9UI33 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SCN11AQ9UI33 RNA5SP327-201ENST00000362494 101 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 TAF9BP2-201ENST00000400856 499 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN11AQ9UI33 MTCO1P53-201ENST00000441633 699 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 RPS26P55-201ENST00000471178 356 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 AC021739.1-201ENST00000559631 174 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 BNIP3P16-201ENST00000589779 534 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SCN11AQ9UI33 AL021879.1-201ENST00000611756 288 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 uc_338.22-201ENST00000622722 187 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 AC027335.2-201ENST00000624030 375 ntBASIC0.37□□□□□ -2.35
SCN11AQ9UI33 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.37□□□□□ -2.35
SCN11AQ9UI33 AL359854.1-201ENST00000614203 1594 ntBASIC0.36□□□□□ -2.35
SCN11AQ9UI33 MTND4P16-201ENST00000466108 1367 ntBASIC0.36□□□□□ -2.35
SCN11AQ9UI33 RNU5E-1-201ENST00000362477 120 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms