Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RNU1-140P-201ENST00000365040 165 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 RPS15AP7-201ENST00000439294 405 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 SUMO1P3-201ENST00000439961 304 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 AC012308.1-201ENST00000451232 178 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 RNU6-1114P-201ENST00000516022 107 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 RNA5SP497-201ENST00000516081 97 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 AC011602.1-201ENST00000546484 331 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 AC023824.2-201ENST00000566185 400 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 MIR4660-201ENST00000583549 74 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 AC009779.6-201ENST00000603972 165 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 AL021997.2-201ENST00000615674 271 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 AL138721.1-201ENST00000616756 179 ntBASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.7□□□□□ -1.66
CXXC1Q9P0U4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AL133243.3-201ENST00000617415 3004 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 RNU6-1280P-201ENST00000365211 107 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 RNU6-1035P-201ENST00000384477 107 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 NDUFB4P4-201ENST00000404822 243 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 Y_RNA.602-201ENST00000410535 92 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 HSPE1P12-201ENST00000412576 301 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AC074117.2-201ENST00000417130 397 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AC016700.2-201ENST00000446011 156 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 RPL26P9-201ENST00000457466 433 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AC097462.2-201ENST00000504623 481 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AC010900.2-201ENST00000604508 210 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AC073657.2-201ENST00000605661 303 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 BX284668.6-201ENST00000606899 438 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 FAM27D1-201ENST00000612308 341 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 ZNF826P-207ENST00000622273 1910 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 AC073346.2-201ENST00000624724 2058 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 HSPA8P1-201ENST00000425843 1833 ntBASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXXC1Q9P0U4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AL672296.1-201ENST00000427780 2158 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 SNORD113-8-201ENST00000363497 74 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 SNORD32A-201ENST00000364805 84 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 SNORA73.2-201ENST00000364946 201 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 SNORA29-201ENST00000384183 140 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 Y_RNA.785-201ENST00000384290 109 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 RNU1-139P-201ENST00000391307 165 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AL603910.2-201ENST00000407268 136 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 YPEL5P1-201ENST00000419731 367 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 RPL23AP95-201ENST00000426806 265 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 MRPL42P6-201ENST00000486397 371 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AF186996.7-201ENST00000492781 209 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 HMGB3P16-201ENST00000508037 287 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AC110768.1-201ENST00000509222 400 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 RNU4-71P-201ENST00000516258 113 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 RNU5B-3P-201ENST00000516601 115 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 MIR5685-201ENST00000579080 79 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AC011471.1-201ENST00000585766 187 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AC011476.5-201ENST00000615594 130 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AL450472.1-202ENST00000637286 180 ntBASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CXXC1Q9P0U4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
CXXC1Q9P0U4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CXXC1Q9P0U4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CXXC1Q9P0U4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXXC1Q9P0U4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms