Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
VAPAQ9P0L0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.55□□□□□ -2.16
VAPAQ9P0L0 RBBP8P1-201ENST00000449447 1844 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 SMIM11P1-201ENST00000369586 178 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 SNORA40.18-201ENST00000391200 128 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 POLHP1-201ENST00000411806 470 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AC016831.2-201ENST00000417179 352 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AL591704.1-201ENST00000432574 275 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AC012308.1-201ENST00000451232 178 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 RNA5SP57-201ENST00000459463 123 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 MED28P2-201ENST00000475771 317 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.55□□□□□ -2.16
VAPAQ9P0L0 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.55□□□□□ -2.16
VAPAQ9P0L0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AC092436.1-201ENST00000506450 503 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.55□□□□□ -2.16
VAPAQ9P0L0 RNU2-53P-201ENST00000516257 147 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 RNU6-914P-201ENST00000516749 109 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AP004247.1-201ENST00000531556 1289 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 ARL2BPP2-201ENST00000550907 489 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 IMMP1LP2-201ENST00000552954 492 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AL157871.3-201ENST00000557231 293 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.55□□□□□ -2.16
VAPAQ9P0L0 VN1R82P-201ENST00000601481 356 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 KC877982.1-201ENST00000602313 470 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AP001981.2-201ENST00000603241 418 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 SEPT7P9-203ENST00000604116 343 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AC009318.2-201ENST00000610917 651 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AL365204.3-201ENST00000612448 685 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AC084768.2-201ENST00000622736 221 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 AC090517.3-201ENST00000625170 141 ntBASIC1.55□□□□□ -2.16
VAPAQ9P0L0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.55□□□□□ -2.16
VAPAQ9P0L0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
VAPAQ9P0L0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
VAPAQ9P0L0 RNY3P13-201ENST00000365542 102 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 MIR186-201ENST00000384988 86 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 RNA5SP212-201ENST00000391223 107 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 RSL24D1P4-201ENST00000400938 484 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 RNU2-36P-201ENST00000410361 191 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 PIGPP2-201ENST00000411569 458 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AC009518.2-201ENST00000418056 731 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AL035407.1-201ENST00000429211 571 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 HMGN2P3-201ENST00000433603 273 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 HMGN2P5-201ENST00000436882 273 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 MTCO2P20-201ENST00000437339 673 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 SNORD97-201ENST00000459187 142 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AC104685.1-201ENST00000502445 371 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AC098799.1-201ENST00000504752 800 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.54□□□□□ -2.16
VAPAQ9P0L0 RNU6-677P-201ENST00000516914 101 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AC068587.4-201ENST00000533893 186 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AL356432.3-201ENST00000568952 465 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AF131215.7-201ENST00000602443 707 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AC092656.1-203ENST00000624134 423 ntBASIC1.54□□□□□ -2.16
VAPAQ9P0L0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.54□□□□□ -2.16
VAPAQ9P0L0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
VAPAQ9P0L0 Y_RNA.33-201ENST00000362591 102 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 RNU6-433P-201ENST00000363216 104 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
VAPAQ9P0L0 MIR1283-2-201ENST00000408621 87 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 RNU4-26P-201ENST00000410270 107 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 RNU2-32P-201ENST00000411193 191 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 RN7SKP101-201ENST00000411376 320 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 OR9R1P-201ENST00000412200 877 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 BX510359.4-201ENST00000423750 193 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 MTND2P29-201ENST00000438595 412 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 MTND3P1-201ENST00000441336 220 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 RPL23AP35-201ENST00000451906 501 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.53□□□□□ -2.16
VAPAQ9P0L0 RPS29P21-201ENST00000496272 170 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AC092104.1-201ENST00000497346 1441 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AP005660.1-201ENST00000522972 293 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AP000763.2-201ENST00000540641 163 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 GNAI2P1-201ENST00000541815 315 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AC091544.4-201ENST00000555268 342 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 YWHAZP1-201ENST00000556286 722 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AC136618.2-201ENST00000575091 400 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 MIR1273C-201ENST00000578669 77 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.53□□□□□ -2.16
VAPAQ9P0L0 BNIP3P30-201ENST00000601184 574 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 CLIC4P2-201ENST00000601934 717 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AC069431.2-201ENST00000604149 1099 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 BNIP3P31-201ENST00000604515 566 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AC098614.4-201ENST00000607601 462 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AL359314.1-201ENST00000616913 261 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AC108479.2-201ENST00000617314 601 ntBASIC1.53□□□□□ -2.16
VAPAQ9P0L0 AC004808.1-201ENST00000627671 721 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms