Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MTND4P7-201ENST00000523876 130 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 HMGB1P14-201ENST00000557424 591 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AC026464.5-201ENST00000562497 722 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 MTCO3P13-201ENST00000577757 781 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AC005498.1-201ENST00000592125 465 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AC136601.2-201ENST00000604356 474 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AL050343.2-201ENST00000607338 280 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AL160413.1-201ENST00000622780 310 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AC022336.2-201ENST00000568966 2538 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 RNA5SP374-201ENST00000362939 125 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU1-140P-201ENST00000365040 165 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 Y_RNA.373-201ENST00000365600 103 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 Y_RNA.474-201ENST00000384341 102 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 CISD1P1-201ENST00000393907 327 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AL590004.1-201ENST00000405321 300 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 SNORA11.2-201ENST00000408318 127 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 RNA5SP111-201ENST00000411386 101 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AC080125.1-201ENST00000414888 684 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 USP9YP20-201ENST00000419224 558 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AF228730.4-201ENST00000421457 183 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 HSPE1P1-201ENST00000421494 318 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AL592045.1-201ENST00000429867 352 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AC005534.2-201ENST00000431047 433 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 Z75741.1-201ENST00000446793 314 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AC104058.1-201ENST00000448028 297 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 CECR9-201ENST00000453421 199 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 SCARNA18-201ENST00000459004 134 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 S100A11P2-201ENST00000467589 312 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 HMGN2P13-201ENST00000476476 274 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 RPS15AP34-201ENST00000487776 387 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-711P-201ENST00000517255 106 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 RANP3-201ENST00000530970 276 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 OR11H5P-201ENST00000554039 926 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AC106782.4-201ENST00000568264 210 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AC243960.4-201ENST00000600532 288 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AL591516.1-201ENST00000611326 274 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 RMST_7.1-201ENST00000621935 268 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 AL512643.1-201ENST00000635735 524 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 Z99571.1-201ENST00000636677 394 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NCKIPSDQ9NZQ3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 Y_RNA.58-201ENST00000362807 102 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 Y_RNA.100-201ENST00000363141 102 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 Y_RNA.154-201ENST00000363624 102 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 RNY3P1-201ENST00000365085 102 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 RNY3-201ENST00000365484 102 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 Y_RNA.490-201ENST00000384413 102 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 SNORA16.2-201ENST00000390991 127 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AL357075.1-201ENST00000404107 726 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AL138885.1-201ENST00000405921 675 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AL669831.1-202ENST00000428504 417 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 GTF2IP13-201ENST00000438487 386 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 HMGB1P18-201ENST00000438801 619 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 SNORA59A-201ENST00000459326 152 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AC009901.1-201ENST00000506703 541 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 Y_RNA.691-201ENST00000516611 103 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AC245166.1-201ENST00000521012 253 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AP002404.1-201ENST00000532005 451 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AP000867.2-201ENST00000532468 320 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AL163153.1-201ENST00000554223 283 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 MIR3942-201ENST00000585264 109 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AL670379.4-201ENST00000605279 254 ntBASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NCKIPSDQ9NZQ3 AC093913.1-201ENST00000614178 329 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms