Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 SNORD3E-201ENST00000362899 217 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 MIR218-1-201ENST00000384999 110 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 FTH1P15-201ENST00000406984 280 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 AC097463.2-201ENST00000421074 142 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 MTCO2P11-201ENST00000431069 680 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 AL358934.1-201ENST00000432346 324 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 GSTA11P-201ENST00000452866 669 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 MED28P2-201ENST00000475771 317 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 AC105417.1-201ENST00000514691 285 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 LRRC34P2-201ENST00000514850 553 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 LARP7P3-201ENST00000579888 337 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 AC023043.3-201ENST00000593113 385 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 RMST_4.1-201ENST00000616886 107 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 HSPA8P4-201ENST00000511877 1920 ntBASIC2.95□□□□□ -1.94
BLOC1S4Q9NUP1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 Z75746.1-201ENST00000440243 2080 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 RNU6-487P-201ENST00000365430 104 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 RNU6-1029P-201ENST00000384109 107 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 RNU6-220P-201ENST00000390919 107 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 CIR1P3-201ENST00000405137 479 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 RNA5SP344-201ENST00000411081 104 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 MTATP6P18-201ENST00000417994 673 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 COTL1P1-201ENST00000422309 375 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC073464.1-201ENST00000429823 534 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC108938.1-201ENST00000451204 136 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 RPS3AP17-201ENST00000472594 777 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC011005.2-201ENST00000487324 359 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC079140.3-201ENST00000511111 550 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC079598.5-201ENST00000547460 117 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AC136475.10-201ENST00000620253 385 ntBASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
BLOC1S4Q9NUP1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 SNORA38-201ENST00000363946 132 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 RNU2-52P-201ENST00000410680 190 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 RPL30P4-201ENST00000429309 333 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 MTATP6P26-201ENST00000445926 662 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AL356010.1-201ENST00000456364 102 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 RPS29P15-201ENST00000458329 171 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 SNORD109B-201ENST00000458961 67 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 SNORD109A-201ENST00000459128 67 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 RNA5SP282-201ENST00000516355 108 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 RPL7P20-201ENST00000520308 745 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 CR383656.8-201ENST00000549046 145 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 MIR4703-201ENST00000577728 79 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 MIR5571-201ENST00000577998 113 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AC008536.2-201ENST00000607284 349 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AC098614.4-201ENST00000607601 462 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AC011890.2-201ENST00000613393 294 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 AC024581.2-201ENST00000619986 252 ntBASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.93□□□□□ -1.94
BLOC1S4Q9NUP1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 OR56A5-201ENST00000340110 738 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 Y_RNA.296-201ENST00000364930 108 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 RNU6-1103P-201ENST00000384150 107 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 RNU6-45P-201ENST00000384471 107 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 Y_RNA.582-201ENST00000391023 95 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 RNU2-29P-201ENST00000410423 189 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 RPS3AP44-201ENST00000425466 790 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 AC011816.1-201ENST00000441346 546 ntBASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.92□□□□□ -1.94
BLOC1S4Q9NUP1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms