Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 AC104806.1-201ENST00000508720 308 ntBASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 AC091965.2-201ENST00000512324 613 ntBASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 SMURF2P1-201ENST00000514992 481 ntBASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 AC135279.1-201ENST00000543493 504 ntBASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 BNIP3P22-201ENST00000593399 556 ntBASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 AL033523.1-201ENST00000605153 153 ntBASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 AL158063.1-201ENST00000615349 536 ntBASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ZCCHC3Q9NUD5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 RNU6-384P-201ENST00000364900 104 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 MIR34A-201ENST00000385130 110 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 MIR1302-8-201ENST00000408342 128 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC090960.1-201ENST00000421072 306 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 PIGFP2-201ENST00000421400 651 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC063976.3-201ENST00000426849 329 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC133104.1-201ENST00000429100 218 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 KATNBL1P3-201ENST00000443475 909 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC079448.1-201ENST00000449377 373 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 MTND1P27-201ENST00000451117 902 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 MED28P2-201ENST00000475771 317 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC008526.1-201ENST00000509149 338 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 SNORA25.11-201ENST00000515935 105 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 MIR892C-201ENST00000516410 77 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 Y_RNA.695-201ENST00000516715 107 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 OR5AL2P-201ENST00000532185 920 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC040904.1-201ENST00000590850 223 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC006566.1-201ENST00000608943 513 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC109347.2-201ENST00000610220 349 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 AC011155.2-201ENST00000623202 216 ntBASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.35□□□□□ -2.03
ZCCHC3Q9NUD5 RNU6-858P-201ENST00000362436 107 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 RNU6-282P-201ENST00000365357 103 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 MIR454-201ENST00000390180 115 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AL133475.1-201ENST00000404414 305 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 Z92545.1-201ENST00000411782 234 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 OR6C66P-201ENST00000414917 930 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 RPL21P90-201ENST00000415692 466 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 CYCSP48-201ENST00000417124 323 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 MTND2P4-201ENST00000445034 1004 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 snoU109.2-201ENST00000459316 135 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AC112771.1-201ENST00000463581 102 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AC010486.3-201ENST00000511602 785 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AC090136.1-201ENST00000520009 240 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AP004607.1-201ENST00000524456 203 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 EIF4BP1-201ENST00000554881 351 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 MIR4319-201ENST00000577285 85 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 MIR3913-1-201ENST00000577744 102 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 MIR4775-201ENST00000581168 75 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AC087752.4-201ENST00000605911 462 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 AC097520.1-201ENST00000624435 385 ntBASIC2.34□□□□□ -2.03
ZCCHC3Q9NUD5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
ZCCHC3Q9NUD5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 RNU1-72P-201ENST00000362976 153 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 SNORA38-201ENST00000363946 132 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 SNORA62.1-201ENST00000364287 154 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 RNU6-843P-201ENST00000384454 104 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 MIR196B-201ENST00000384852 84 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 MIR1-2-201ENST00000384961 85 ntBASIC2.33□□□□□ -2.04
ZCCHC3Q9NUD5 MIR27B-201ENST00000385129 97 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms