Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL670379.10-201ENST00000604330 253 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AC008162.1-201ENST00000604718 254 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL670379.1-201ENST00000604752 252 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL670379.2-201ENST00000604983 252 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL670379.5-201ENST00000605253 252 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL670379.4-201ENST00000605279 254 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL670379.12-201ENST00000605291 253 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL670379.8-201ENST00000605353 252 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL670379.9-201ENST00000605428 253 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AC021646.1-201ENST00000605469 484 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL670379.7-201ENST00000605823 252 ntBASIC1.24□□□□□ -2.21
CISHQ9NSE2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.24□□□□□ -2.21
CISHQ9NSE2 AC138393.1-203ENST00000327086 343 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 MIR424-201ENST00000362227 98 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 RNU6-744P-201ENST00000365557 107 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 RNU6-1316P-201ENST00000384242 108 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 AC011005.2-201ENST00000487324 359 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 TPT1P8-201ENST00000510120 555 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 SNORA31.3-201ENST00000516029 96 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 RNU5B-3P-201ENST00000516601 115 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 OR5B19P-201ENST00000531766 928 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 ELOCP5-201ENST00000604924 333 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 AL359821.1-201ENST00000605519 182 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 MIR6078-201ENST00000611069 100 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 AC097655.1-201ENST00000635075 318 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CISHQ9NSE2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
CISHQ9NSE2 AC091812.1-201ENST00000432235 1948 ntBASIC1.23□□□□□ -2.21
CISHQ9NSE2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CISHQ9NSE2 DDX43P2-201ENST00000604753 1354 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 AL359634.1-202ENST00000404721 284 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 OR51A5P-201ENST00000415429 942 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 TIMM9P2-201ENST00000419324 266 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 UBE2V1P4-201ENST00000425374 344 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 AC104651.1-201ENST00000427559 735 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.22□□□□□ -2.21
CISHQ9NSE2 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.22□□□□□ -2.21
CISHQ9NSE2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.22□□□□□ -2.21
CISHQ9NSE2 AC116655.1-201ENST00000508324 901 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 SNORA44.1-201ENST00000517031 108 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 AC021451.1-201ENST00000523498 1129 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 DEFB131D-201ENST00000526803 184 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 AL133153.1-201ENST00000557756 303 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 DPPA3P3-201ENST00000603842 430 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.22□□□□□ -2.21
CISHQ9NSE2 AC034229.4-201ENST00000607861 441 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 AL354696.1-201ENST00000614652 497 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 AC099842.1-201ENST00000619919 596 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 TEX21P-201ENST00000447107 1476 ntBASIC1.22□□□□□ -2.21
CISHQ9NSE2 RNU6-188P-201ENST00000364207 107 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 RNU6-512P-201ENST00000364438 103 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 RNU6-1280P-201ENST00000365211 107 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 MIR30A-201ENST00000385092 71 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 RPL23AP36-201ENST00000413895 458 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 SNRPEP7-201ENST00000438350 220 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 AC092473.1-201ENST00000441098 221 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 ELOCP30-201ENST00000447108 299 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 FCF1P6-201ENST00000456841 595 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 Y_RNA.638-201ENST00000459374 113 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 RNA5SP57-201ENST00000459463 123 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 AC006512.1-201ENST00000468816 291 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 RPL7P43-201ENST00000478876 753 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 AC023194.1-201ENST00000493084 308 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 AC139453.3-201ENST00000493276 369 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 AC108729.3-201ENST00000513484 108 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 RNU6-150P-201ENST00000516237 95 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.21□□□□□ -2.22
CISHQ9NSE2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.21□□□□□ -2.22
CISHQ9NSE2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.21□□□□□ -2.22
CISHQ9NSE2 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.21□□□□□ -2.22
CISHQ9NSE2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.21□□□□□ -2.22
CISHQ9NSE2 AC023825.1-201ENST00000566704 1030 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.21□□□□□ -2.22
CISHQ9NSE2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.21□□□□□ -2.22
CISHQ9NSE2 AC068880.4-201ENST00000623082 495 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 AP003485.1-201ENST00000625093 753 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 U6.99-201ENST00000637524 83 ntBASIC1.21□□□□□ -2.22
CISHQ9NSE2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 RNU6-53P-201ENST00000365367 106 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.2□□□□□ -2.22
CISHQ9NSE2 AL603865.2-201ENST00000401679 213 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 RPS12P24-201ENST00000412619 387 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms