Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL133270.1-201ENST00000402635 279 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 SNORA11F-201ENST00000408237 128 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 Y_RNA.626-201ENST00000411288 95 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.2□□□□□ -1.74
SSU72Q9NP77 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.2□□□□□ -1.74
SSU72Q9NP77 SNRPEP9-201ENST00000436794 238 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 AC005002.2-201ENST00000438228 269 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.2□□□□□ -1.74
SSU72Q9NP77 AF186996.7-201ENST00000492781 209 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 AC091874.1-201ENST00000511402 339 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 SNORA43.2-201ENST00000516652 128 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 RNA5SP73-201ENST00000516744 108 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 AC087441.2-201ENST00000529141 262 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 MIR4489-201ENST00000578869 62 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.2□□□□□ -1.74
SSU72Q9NP77 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.2□□□□□ -1.74
SSU72Q9NP77 MIR486-1-201ENST00000612171 68 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.2□□□□□ -1.74
SSU72Q9NP77 AC097372.5-201ENST00000623665 376 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 AL773545.4-201ENST00000637262 310 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 AL513478.4-201ENST00000641636 310 ntBASIC4.2□□□□□ -1.74
SSU72Q9NP77 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.2□□□□□ -1.74
SSU72Q9NP77 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSU72Q9NP77 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSU72Q9NP77 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSU72Q9NP77 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSU72Q9NP77 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSU72Q9NP77 AC009541.1-201ENST00000438279 2662 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.19□□□□□ -1.74
SSU72Q9NP77 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSU72Q9NP77 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.19□□□□□ -1.74
SSU72Q9NP77 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSU72Q9NP77 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.19□□□□□ -1.74
SSU72Q9NP77 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSU72Q9NP77 MARK2P15-201ENST00000432204 2186 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 Y_RNA.44-201ENST00000362676 108 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 RNU4-90P-201ENST00000362773 141 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 RNU6-942P-201ENST00000363002 107 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 RNU6-740P-201ENST00000364734 105 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 SNORD113-1-201ENST00000365321 69 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 RNU6-47P-201ENST00000383866 107 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 MIR518D-201ENST00000385014 87 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 MIR298-201ENST00000401212 88 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.19□□□□□ -1.74
SSU72Q9NP77 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.19□□□□□ -1.74
SSU72Q9NP77 PPIAP20-201ENST00000449839 135 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 SNORD108-201ENST00000459332 71 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 AP000870.1-201ENST00000472927 406 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.19□□□□□ -1.74
SSU72Q9NP77 SNORD116-28-201ENST00000516123 91 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 RNU6-861P-201ENST00000516745 106 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 RN7SKP272-201ENST00000516988 232 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 HMGN2P6-201ENST00000551091 273 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.19□□□□□ -1.74
SSU72Q9NP77 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.19□□□□□ -1.74
SSU72Q9NP77 AP002826.1-201ENST00000608835 315 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 uc_338.13-201ENST00000618243 179 ntBASIC4.19□□□□□ -1.74
SSU72Q9NP77 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.19□□□□□ -1.74
SSU72Q9NP77 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SSU72Q9NP77 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSU72Q9NP77 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSU72Q9NP77 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSU72Q9NP77 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SSU72Q9NP77 MAPK10-373ENST00000641983 6772 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSU72Q9NP77 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSU72Q9NP77 Y_RNA.122-201ENST00000363331 96 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 RNA5SP507-201ENST00000363603 121 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 SNORD113.2-201ENST00000364166 89 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 RNU6-1286P-201ENST00000383871 107 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 MIR124-3-201ENST00000384866 87 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SSU72Q9NP77 RPS4XP3-201ENST00000398541 413 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 RPL23AP27-201ENST00000415161 451 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 AC092047.1-201ENST00000424997 240 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 OR4C10P-201ENST00000434991 931 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 AC243964.1-201ENST00000441814 261 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.18□□□□□ -1.74
SSU72Q9NP77 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.18□□□□□ -1.74
SSU72Q9NP77 RPL26P26-201ENST00000480251 434 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 AL592156.1-201ENST00000508758 304 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 SNORA25.14-201ENST00000516481 132 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 AC022559.1-201ENST00000520905 205 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.18□□□□□ -1.74
SSU72Q9NP77 MIR4423-201ENST00000580922 80 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 AC024153.1-201ENST00000603103 365 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 AL590240.4-201ENST00000616908 390 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.18□□□□□ -1.74
SSU72Q9NP77 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.18□□□□□ -1.74
SSU72Q9NP77 AC027309.3-201ENST00000623419 351 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 ZNF826P-207ENST00000622273 1910 ntBASIC4.18□□□□□ -1.74
SSU72Q9NP77 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSU72Q9NP77 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SSU72Q9NP77 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.18□□□□□ -1.74
SSU72Q9NP77 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.18□□□□□ -1.74
SSU72Q9NP77 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SSU72Q9NP77 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSU72Q9NP77 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSU72Q9NP77 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.17□□□□□ -1.74
SSU72Q9NP77 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms