Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MED28P2-201ENST00000475771 317 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 HMGB1P35-201ENST00000503360 598 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC119751.4-201ENST00000507498 357 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC010486.1-201ENST00000511793 424 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC008549.1-201ENST00000512900 643 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 OR5AQ1P-201ENST00000527596 927 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC090888.2-201ENST00000559765 1144 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 MTND1P8-201ENST00000571424 950 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC026271.5-201ENST00000577873 130 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC073410.2-201ENST00000603240 332 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AL627230.6-201ENST00000611129 280 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC092106.3-201ENST00000611308 722 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC098657.3-201ENST00000620434 263 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 AC024940.5-201ENST00000622889 474 ntBASIC2.03□□□□□ -2.08
LRRC40Q9H9A6 RBBP8P1-201ENST00000449447 1844 ntBASIC2.03□□□□□ -2.09
LRRC40Q9H9A6 AL445523.1-201ENST00000451184 1362 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 SSR1P2-201ENST00000415208 787 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 AL008987.1-201ENST00000415528 237 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 AL365338.1-201ENST00000422282 858 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 RPS27AP14-201ENST00000422868 454 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 AC008267.5-201ENST00000424928 265 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 AL139415.2-201ENST00000431968 163 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 MIR3118-1-201ENST00000581787 76 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 ELOCP5-201ENST00000604924 333 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 DUXAP9-208ENST00000622815 614 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 MIR3529-201ENST00000637713 78 ntBASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.02□□□□□ -2.09
LRRC40Q9H9A6 AC092881.1-201ENST00000638218 2733 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 CENPCP1-201ENST00000533085 2578 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 SNORA75B-201ENST00000384053 137 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 AL445646.1-201ENST00000431784 216 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 RPL23AP3-201ENST00000453844 468 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 AC007182.2-201ENST00000489251 402 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 RNU2-53P-201ENST00000516257 147 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 RNU7-51P-201ENST00000516560 62 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 RNU6-586P-201ENST00000517265 104 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 MTND4LP18-201ENST00000526864 291 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 MIR5089-201ENST00000580047 84 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 MIR4999-201ENST00000585029 91 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 BNIP3P30-201ENST00000601184 574 ntBASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.01□□□□□ -2.09
LRRC40Q9H9A6 AC008555.8-201ENST00000623602 2168 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
LRRC40Q9H9A6 Y_RNA.500-201ENST00000384466 111 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 MIR518A2-201ENST00000384966 87 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 MIR186-201ENST00000384988 86 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 MIR513B-201ENST00000385136 84 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 SNORA40.19-201ENST00000390846 128 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 RNU6-1140P-201ENST00000410517 106 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 Y_RNA.623-201ENST00000411128 95 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 RNA5SP450-201ENST00000411206 102 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 AL353689.1-201ENST00000438895 199 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 AC118469.1-201ENST00000442943 488 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 MTND6P13-201ENST00000443510 523 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 MTND1P12-201ENST00000455231 147 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 snoU109.2-201ENST00000459316 135 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 AL096840.1-201ENST00000603287 93 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2□□□□□ -2.09
LRRC40Q9H9A6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2□□□□□ -2.09
LRRC40Q9H9A6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
LRRC40Q9H9A6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 RNU6-1010P-201ENST00000362757 107 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms