Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MRPL50P4-201ENST00000446432 475 ntBASIC2.52□□□□□ -2.01
UBQLN3Q9H347 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.52□□□□□ -2.01
UBQLN3Q9H347 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.52□□□□□ -2.01
UBQLN3Q9H347 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
UBQLN3Q9H347 snoU109.2-201ENST00000459316 135 ntBASIC2.52□□□□□ -2.01
UBQLN3Q9H347 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.52□□□□□ -2.01
UBQLN3Q9H347 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.52□□□□□ -2.01
UBQLN3Q9H347 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
UBQLN3Q9H347 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.52□□□□□ -2.01
UBQLN3Q9H347 AC011890.2-201ENST00000613393 294 ntBASIC2.52□□□□□ -2.01
UBQLN3Q9H347 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.51□□□□□ -2.01
UBQLN3Q9H347 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
UBQLN3Q9H347 Y_RNA.1-201ENST00000352915 104 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AC062016.1-201ENST00000355719 319 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 Y_RNA.194-201ENST00000363985 102 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 RNU6-371P-201ENST00000364283 108 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 RNU1-112P-201ENST00000364401 164 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 RNU4-24P-201ENST00000364565 139 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 RNU6-606P-201ENST00000384721 111 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 MIR10A-201ENST00000385043 110 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AC068050.1-201ENST00000394891 380 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 RNU2-66P-201ENST00000410650 161 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 RNU4-55P-201ENST00000410731 137 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AC016831.2-201ENST00000417179 352 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 MTCO3P30-201ENST00000426425 670 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBQLN3Q9H347 DLGAP5P1-201ENST00000430307 464 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AL627311.1-201ENST00000431514 115 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.51□□□□□ -2.01
UBQLN3Q9H347 SNORA59A-201ENST00000459326 152 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AL121769.1-201ENST00000469473 401 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AC108078.1-201ENST00000508073 725 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 RNU6-1178P-201ENST00000516674 107 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AC109329.2-201ENST00000519658 482 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AC090136.1-201ENST00000520009 240 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 ELOCP31-201ENST00000540463 467 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 MIR4319-201ENST00000577285 85 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.51□□□□□ -2.01
UBQLN3Q9H347 NDUFA8P1-201ENST00000605525 367 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AC008945.2-201ENST00000606056 604 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 AC104073.3-201ENST00000610942 955 ntBASIC2.51□□□□□ -2.01
UBQLN3Q9H347 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
UBQLN3Q9H347 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.51□□□□□ -2.01
UBQLN3Q9H347 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 MTND4P27-201ENST00000450813 1354 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC080128.1-201ENST00000474389 1917 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 CDC27P3-201ENST00000635418 1910 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 RNU6-259P-201ENST00000383999 107 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 MIR518D-201ENST00000385014 87 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AL591416.1-201ENST00000404015 867 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AL096701.2-201ENST00000416920 238 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 NUP35P1-201ENST00000422734 947 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AL360271.2-201ENST00000447710 161 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 HMGB1P29-201ENST00000505659 499 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC092436.1-201ENST00000506450 503 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC023141.11-201ENST00000508864 202 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC008716.1-201ENST00000511084 513 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC091133.4-201ENST00000511142 308 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 SNORA31.6-201ENST00000516241 130 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 ACA59.2-201ENST00000517061 156 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 BTF3P12-201ENST00000519620 469 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC004486.1-201ENST00000546846 233 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 MIR4703-201ENST00000577728 79 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC103987.3-201ENST00000582071 292 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 MIR4672-201ENST00000583126 81 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC004223.2-201ENST00000590309 544 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AL391646.1-201ENST00000603860 190 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AC087045.1-201ENST00000605856 382 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 AP001486.3-201ENST00000615334 372 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.5□□□□□ -2.01
UBQLN3Q9H347 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
UBQLN3Q9H347 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.49□□□□□ -2.01
UBQLN3Q9H347 MTND5P26-201ENST00000426018 1752 ntBASIC2.49□□□□□ -2.01
UBQLN3Q9H347 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
UBQLN3Q9H347 OR4G2P-201ENST00000328113 903 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms