Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC019235.1-201ENST00000503847 207 ntBASIC3.16□□□□□ -1.9
USP44Q9H0E7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.16□□□□□ -1.9
USP44Q9H0E7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.16□□□□□ -1.9
USP44Q9H0E7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.16□□□□□ -1.9
USP44Q9H0E7 MIR4782-201ENST00000577987 79 ntBASIC3.16□□□□□ -1.9
USP44Q9H0E7 MIR4506-201ENST00000584693 77 ntBASIC3.16□□□□□ -1.9
USP44Q9H0E7 MIR548AC-201ENST00000585049 88 ntBASIC3.16□□□□□ -1.9
USP44Q9H0E7 AL645944.1-201ENST00000603857 493 ntBASIC3.16□□□□□ -1.9
USP44Q9H0E7 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.16□□□□□ -1.9
USP44Q9H0E7 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.16□□□□□ -1.9
USP44Q9H0E7 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.16□□□□□ -1.9
USP44Q9H0E7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
USP44Q9H0E7 Y_RNA.372-201ENST00000365599 102 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP44Q9H0E7 RNU6-1025P-201ENST00000410629 104 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC027673.1-201ENST00000456245 405 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 AL590639.1-201ENST00000456484 337 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 RNU7-63P-201ENST00000459054 62 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 RPS27AP10-201ENST00000496103 208 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 SUMO2P6-201ENST00000505273 288 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC009646.1-201ENST00000510455 318 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 SNORD19.2-201ENST00000516978 73 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 RPL7P20-201ENST00000520308 745 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 MIR4513-201ENST00000581077 86 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC007938.3-201ENST00000604965 623 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 AL670379.4-201ENST00000605279 254 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.15□□□□□ -1.91
USP44Q9H0E7 AP001596.2-201ENST00000608410 312 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 AC139792.3-201ENST00000623525 224 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 MIR3199-2-201ENST00000636243 86 ntBASIC3.15□□□□□ -1.91
USP44Q9H0E7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP44Q9H0E7 MTND4P14-201ENST00000435799 1354 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP44Q9H0E7 RNU6-1085P-201ENST00000363576 107 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 Y_RNA.381-201ENST00000365666 102 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 RNU6-1029P-201ENST00000384109 107 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 MIR181A1-201ENST00000385026 110 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 MIR767-201ENST00000390228 109 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 SNORA40C-201ENST00000391285 128 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 CISD1P1-201ENST00000393907 327 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 MIR548F1-201ENST00000408667 84 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 RN7SKP123-201ENST00000410732 291 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 FCF1P9-201ENST00000412546 282 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 AL358075.3-201ENST00000426289 226 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 HMGB1P30-201ENST00000492455 606 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 RBBP4P6-201ENST00000508098 202 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 AC008716.1-201ENST00000511084 513 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 MTND1P5-201ENST00000517906 940 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 LINC00933-203ENST00000559812 219 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 MIR4703-201ENST00000577728 79 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 AC126118.1-201ENST00000607744 628 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 AC026585.1-201ENST00000619582 524 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 U4.3-201ENST00000621047 82 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 U6.99-201ENST00000637524 83 ntBASIC3.14□□□□□ -1.91
USP44Q9H0E7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
USP44Q9H0E7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP44Q9H0E7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 OR4G2P-201ENST00000328113 903 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 RNA5SP456-201ENST00000364002 114 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USP44Q9H0E7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 RPS15AP5-201ENST00000436276 388 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 AL078601.1-201ENST00000444542 271 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 HMGN2P10-201ENST00000448085 265 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USP44Q9H0E7 RNU6-261P-201ENST00000459506 102 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.13□□□□□ -1.91
USP44Q9H0E7 AC009901.1-201ENST00000506703 541 ntBASIC3.13□□□□□ -1.91
USP44Q9H0E7 AC113155.1-201ENST00000511141 769 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms