Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 AL357134.1-201ENST00000445848 426 ntBASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 AC068338.1-201ENST00000565567 176 ntBASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 AC103810.8-201ENST00000607347 118 ntBASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 MIR6134-201ENST00000617606 109 ntBASIC1.62□□□□□ -2.15
UPF3BQ9BZI7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 RNU1-62P-201ENST00000362599 164 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 RNU6-658P-201ENST00000384606 106 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 RNA5SP465-201ENST00000391195 109 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AC068050.1-201ENST00000394891 380 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 RPL17P35-201ENST00000432217 549 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 MTCYBP18-201ENST00000501056 747 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 MTCYBP35-201ENST00000503630 1137 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 RNU5B-3P-201ENST00000516601 115 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AP003033.1-201ENST00000527244 415 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 MIR3912-201ENST00000577566 105 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AC098483.2-201ENST00000603158 454 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AL713866.2-201ENST00000603579 219 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 MIR7974-201ENST00000615835 79 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AL359314.1-201ENST00000616913 261 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AC013470.4-201ENST00000619978 986 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AL118508.4-201ENST00000624142 1176 ntBASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.61□□□□□ -2.15
UPF3BQ9BZI7 AP000560.1-201ENST00000624150 1937 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 BTF3L4P3-201ENST00000418879 476 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 RPL36AP53-201ENST00000432891 316 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 RPS15AP9-201ENST00000439856 381 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 MTND5P14-201ENST00000441481 1267 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 BRK1P2-201ENST00000442875 223 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 MTCYBP42-201ENST00000444653 1130 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 HSPE1P24-201ENST00000450782 238 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 RPL37P6-201ENST00000460682 294 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 AC093012.1-202ENST00000549403 582 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 MIR5708-201ENST00000579723 85 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 AL445435.1-201ENST00000604232 665 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 AC021646.1-201ENST00000605469 484 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 uc_338.12-201ENST00000616344 181 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.6□□□□□ -2.15
UPF3BQ9BZI7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 AL589826.1-201ENST00000340697 249 ntBASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 AL139397.2-201ENST00000404529 772 ntBASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 AC087045.1-201ENST00000605856 382 ntBASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.59□□□□□ -2.15
UPF3BQ9BZI7 TEX21P-201ENST00000447107 1476 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 MIR126-201ENST00000362291 85 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 MIR758-201ENST00000390227 88 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 MTCO1P56-201ENST00000401674 224 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 MTND3P20-201ENST00000407663 186 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AC068533.2-201ENST00000411872 306 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 OR9R1P-201ENST00000412200 877 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AC009310.1-201ENST00000414414 451 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 UBE2D3P3-201ENST00000426992 425 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 RPS6P15-201ENST00000431996 751 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AC004223.1-201ENST00000479840 271 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 SNORA25.11-201ENST00000515935 105 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 SNORA31.3-201ENST00000516029 96 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 SNORA44.1-201ENST00000517031 108 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 DEFB130C-202ENST00000530001 230 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AC023538.1-201ENST00000534576 736 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AC023813.2-201ENST00000564321 469 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms