Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 AC090897.2-201ENST00000581715 130 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 VN1R85P-201ENST00000601587 426 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 AC005014.2-201ENST00000607795 599 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 AC015813.4-201ENST00000610469 179 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 AC002543.1-201ENST00000299783 1954 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 MIR448-201ENST00000362131 111 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 RNA5SP388-201ENST00000362584 119 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 SNORD50.1-201ENST00000362987 71 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 SNORD114-19-201ENST00000363072 75 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 Y_RNA.504-201ENST00000384481 104 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 MTCYBP2-201ENST00000407745 171 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 RNU6-1156P-201ENST00000410365 100 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 PMCHL1-202ENST00000423102 261 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AC018865.2-201ENST00000423631 129 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AC008267.5-201ENST00000424928 265 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AL591419.1-201ENST00000427423 339 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 MTND4P19-201ENST00000446659 478 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AL353705.4-201ENST00000449661 238 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 RNU7-175P-201ENST00000515915 61 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 RNU6-120P-201ENST00000516077 103 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AL158827.2-201ENST00000602494 330 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 uc_338.14-201ENST00000613162 166 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 AL691447.3-201ENST00000635020 330 ntBASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAIPQ9BWF2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 Y_RNA.39-201ENST00000362620 98 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 Y_RNA.132-201ENST00000363421 102 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 Y_RNA.216-201ENST00000364205 93 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 AL358075.3-201ENST00000426289 226 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 AC092423.1-201ENST00000430165 186 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 GPM6BP3-201ENST00000442797 145 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 AL031659.1-201ENST00000447075 539 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 RPL7P47-201ENST00000497299 556 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 PPBPP1-201ENST00000510807 373 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 AC144568.1-201ENST00000520139 137 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 AC063950.1-201ENST00000552036 308 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 AC004584.2-201ENST00000570407 410 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 AC022432.1-201ENST00000595739 310 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 AL020997.2-201ENST00000602607 184 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 AC107294.3-201ENST00000609211 526 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 AL138721.1-201ENST00000616756 179 ntBASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAIPQ9BWF2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 Y_RNA.364-201ENST00000365532 101 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 CD24P4-201ENST00000382840 243 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 AL133475.1-201ENST00000404414 305 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 AL356095.1-201ENST00000417217 199 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 RPL7P2-201ENST00000427639 268 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 RNA5SP246-201ENST00000458909 119 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 RPL35AP15-201ENST00000468042 339 ntBASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.67□□□□□ -1.66
TRAIPQ9BWF2 AP001025.1-201ENST00000486139 332 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms