Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AC066616.2-201ENST00000559334 1481 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 MIR208A-201ENST00000362287 71 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 Y_RNA.39-201ENST00000362620 98 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 RPL23AP48-201ENST00000406913 488 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 RNU6-101P-201ENST00000410323 104 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 TOMM20P4-201ENST00000427861 435 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 CBX3P6-201ENST00000430257 527 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 DAP3P1-201ENST00000441522 278 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 AL031274.1-201ENST00000450334 232 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 RPL7P49-201ENST00000471402 708 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 AC022447.4-201ENST00000504053 364 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 BTF3L4P4-201ENST00000506381 449 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 RNU6-475P-201ENST00000516073 104 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 TRAV32-201ENST00000553993 340 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 AL121917.1-203ENST00000605534 577 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 AL606534.2-204ENST00000635008 178 ntBASIC3.6□□□□□ -1.83
NDC1Q9BTX1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDC1Q9BTX1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NDC1Q9BTX1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.59□□□□□ -1.83
NDC1Q9BTX1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.59□□□□□ -1.83
NDC1Q9BTX1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NDC1Q9BTX1 RNA5SP502-201ENST00000362694 119 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 RNU6-384P-201ENST00000364900 104 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 SNORA73.2-201ENST00000364946 201 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 Y_RNA.314-201ENST00000365114 102 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 DEFB109C-201ENST00000382575 264 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 DEFB109B-201ENST00000382656 264 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 U8.11-201ENST00000384699 133 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 U8.12-201ENST00000384701 133 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 RNU6-823P-201ENST00000391042 103 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 Y_RNA.623-201ENST00000411128 95 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 AL592148.1-201ENST00000413568 445 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 AL627311.1-201ENST00000431514 115 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 AL353997.1-201ENST00000432936 108 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 AL583843.1-201ENST00000456070 346 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 U8.18-201ENST00000459285 133 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 RPL17P19-201ENST00000489069 552 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 RPL30P5-201ENST00000494923 336 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 UBE2CP3-201ENST00000502715 450 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.59□□□□□ -1.83
NDC1Q9BTX1 RN7SKP289-201ENST00000517244 295 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 HSBP1P1-201ENST00000555205 166 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.59□□□□□ -1.83
NDC1Q9BTX1 AL645944.1-201ENST00000603857 493 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 AC136601.2-201ENST00000604356 474 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 AC004805.2-201ENST00000605382 482 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 MIR3976-201ENST00000606807 139 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 AC069200.1-201ENST00000609511 323 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 AC099506.2-201ENST00000623074 221 ntBASIC3.59□□□□□ -1.83
NDC1Q9BTX1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.59□□□□□ -1.83
NDC1Q9BTX1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.59□□□□□ -1.83
NDC1Q9BTX1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.59□□□□□ -1.83
NDC1Q9BTX1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NDC1Q9BTX1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NDC1Q9BTX1 SNORA63.1-201ENST00000362493 131 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-37P-201ENST00000362692 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-11P-201ENST00000364234 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 SNORD14B-201ENST00000364533 90 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-99P-201ENST00000364721 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-7-201ENST00000364784 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-1318P-201ENST00000365389 103 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-8-201ENST00000365467 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-25P-201ENST00000383873 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-1-201ENST00000383898 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-48P-201ENST00000384161 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-36P-201ENST00000384172 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-4P-201ENST00000384205 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-5P-201ENST00000384238 107 ntBASIC3.58□□□□□ -1.84
NDC1Q9BTX1 RNU6-3P-201ENST00000384314 107 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms