Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC138623.1-201ENST00000418060 216 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 ELOCP9-201ENST00000418624 239 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 EIF1AXP1-201ENST00000419267 435 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 PGBD4P6-201ENST00000421501 610 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AL591806.2-201ENST00000433122 173 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 MTND3P1-201ENST00000441336 220 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC012308.1-201ENST00000451232 178 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 RPL23AP35-201ENST00000451906 501 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AL137159.1-201ENST00000452808 512 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 PPP1R2P5-201ENST00000457256 603 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 RPL7P43-201ENST00000478876 753 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 MTND1P3-201ENST00000484956 952 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC018868.1-201ENST00000491307 315 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC104685.1-201ENST00000502445 371 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC108210.2-201ENST00000503681 201 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 FAM92A1P2-202ENST00000504766 877 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC091965.2-201ENST00000512324 613 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 RNU6-548P-201ENST00000517083 115 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC013828.2-201ENST00000532487 235 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 NDUFA5P6-201ENST00000542110 379 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 RPL30P11-203ENST00000598995 310 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 VN1R82P-201ENST00000601481 356 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AL391001.1-201ENST00000602747 715 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AP001981.2-201ENST00000603241 418 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 SNRPGP17-201ENST00000603780 214 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC069431.2-201ENST00000604149 1099 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 ELOCP5-201ENST00000604924 333 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 NDUFA8P1-201ENST00000605525 367 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AC018638.7-201ENST00000605836 1114 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AL365204.3-201ENST00000612448 685 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 MIR6845-201ENST00000613182 61 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 AL589994.2-201ENST00000621124 579 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 MTND5P42-201ENST00000637720 498 ntBASIC1.29□□□□□ -2.2
UPK3BQ9BT76 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
UPK3BQ9BT76 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 RNU6-1032P-201ENST00000384100 107 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 AL591034.2-201ENST00000402839 359 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 FTH1P15-201ENST00000406984 280 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 AL591704.1-201ENST00000432574 275 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 LARP1BP3-201ENST00000437229 869 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 snoU109.1-201ENST00000459339 135 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 RPS3AP22-201ENST00000488297 769 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 MTAPP1-201ENST00000489154 819 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 RNU6-237P-201ENST00000515985 71 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 RNU6-586P-201ENST00000517265 104 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK3BQ9BT76 AC011494.1-201ENST00000596454 237 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 BCRP9-201ENST00000605312 388 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 AC080013.3-201ENST00000606839 578 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 AC091965.4-201ENST00000607691 587 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 AC018645.2-201ENST00000609151 472 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.28□□□□□ -2.2
UPK3BQ9BT76 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.28□□□□□ -2.21
UPK3BQ9BT76 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
UPK3BQ9BT76 RNY4P24-201ENST00000362735 96 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 RNU1-23P-201ENST00000363361 144 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 SNORA4.3-201ENST00000365564 137 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.27□□□□□ -2.21
UPK3BQ9BT76 RNU1-57P-201ENST00000384491 166 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 RNA5SP212-201ENST00000391223 107 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 FCF1P10-201ENST00000407590 479 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 RNU6-1025P-201ENST00000410629 104 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 PIGPP2-201ENST00000411569 458 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AC009518.2-201ENST00000418056 731 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AC244636.1-201ENST00000421152 228 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AL591212.2-201ENST00000433923 257 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 RPL7P54-201ENST00000438336 674 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AC003071.1-201ENST00000451219 789 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms