Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.04□□□□□ -1.92
PKP4Q99569 AC093012.1-202ENST00000549403 582 ntBASIC3.04□□□□□ -1.92
PKP4Q99569 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.04□□□□□ -1.92
PKP4Q99569 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.04□□□□□ -1.92
PKP4Q99569 AC010653.1-201ENST00000571108 881 ntBASIC3.04□□□□□ -1.92
PKP4Q99569 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.04□□□□□ -1.92
PKP4Q99569 AL589994.2-201ENST00000621124 579 ntBASIC3.04□□□□□ -1.92
PKP4Q99569 AC103710.2-202ENST00000641454 2853 ntBASIC3.04□□□□□ -1.92
PKP4Q99569 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PKP4Q99569 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.03□□□□□ -1.92
PKP4Q99569 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
PKP4Q99569 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PKP4Q99569 MIR148B-201ENST00000362252 99 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 RNU1-105P-201ENST00000363470 161 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 RNU6-82P-201ENST00000363970 107 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 SMIM11P1-201ENST00000369586 178 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 Y_RNA.384-201ENST00000383909 102 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 RNU6-217P-201ENST00000384164 104 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 Y_RNA.474-201ENST00000384341 102 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 UBE2V1P2-201ENST00000397758 440 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 MIR1302-11-201ENST00000408051 138 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 MIR1302-9-201ENST00000408365 138 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 MIR1302-10-201ENST00000408734 138 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 RNU2-33P-201ENST00000410344 192 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PKP4Q99569 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.03□□□□□ -1.92
PKP4Q99569 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.03□□□□□ -1.92
PKP4Q99569 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.03□□□□□ -1.92
PKP4Q99569 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.03□□□□□ -1.92
PKP4Q99569 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.03□□□□□ -1.92
PKP4Q99569 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.03□□□□□ -1.92
PKP4Q99569 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.03□□□□□ -1.92
PKP4Q99569 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.03□□□□□ -1.92
PKP4Q99569 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.03□□□□□ -1.92
PKP4Q99569 Y_RNA.654-201ENST00000497848 106 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.03□□□□□ -1.92
PKP4Q99569 AC117522.3-201ENST00000507974 584 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 RNA5SP385-201ENST00000515947 110 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 RNU6-390P-201ENST00000516259 103 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 SNORA70.24-201ENST00000517233 118 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 RANP3-201ENST00000530970 276 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.03□□□□□ -1.92
PKP4Q99569 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
PKP4Q99569 AL118558.2-201ENST00000556294 238 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 AC026464.5-201ENST00000562497 722 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.03□□□□□ -1.92
PKP4Q99569 AC005951.2-201ENST00000576282 495 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.03□□□□□ -1.92
PKP4Q99569 AC020895.1-201ENST00000595362 272 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 AC113139.1-201ENST00000605049 239 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 MIR1302-2-201ENST00000607096 138 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 AC092807.2-201ENST00000609367 243 ntBASIC3.03□□□□□ -1.92
PKP4Q99569 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.03□□□□□ -1.92
PKP4Q99569 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.03□□□□□ -1.92
PKP4Q99569 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PKP4Q99569 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.02□□□□□ -1.93
PKP4Q99569 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PKP4Q99569 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PKP4Q99569 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
PKP4Q99569 AC138915.1-201ENST00000565427 1685 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 SNORA38.1-201ENST00000364172 131 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 RNU6-1227P-201ENST00000383981 107 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 Y_RNA.414-201ENST00000384011 101 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 RNU6-701P-201ENST00000384059 107 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 RNU6-1013P-201ENST00000384180 107 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 SNORD15B-201ENST00000384714 146 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 MIR483-201ENST00000385070 76 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 RNU6-550P-201ENST00000391057 101 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 NDUFS5P1-201ENST00000405668 289 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 AL513331.1-201ENST00000411908 397 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 USP9YP20-201ENST00000419224 558 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 RPS12P18-201ENST00000442381 270 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.02□□□□□ -1.93
PKP4Q99569 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.02□□□□□ -1.93
PKP4Q99569 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.02□□□□□ -1.93
PKP4Q99569 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.02□□□□□ -1.93
PKP4Q99569 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.02□□□□□ -1.93
PKP4Q99569 RAC1P5-201ENST00000512182 576 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 RNU6-1038P-201ENST00000516516 104 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 RNU6-685P-201ENST00000517088 95 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 MIR5004-201ENST00000579078 107 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.02□□□□□ -1.93
PKP4Q99569 AC008521.1-201ENST00000587471 187 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 AC174048.1-201ENST00000603389 144 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 YPEL5P2-201ENST00000605553 359 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.02□□□□□ -1.93
PKP4Q99569 AC004696.1-201ENST00000614345 607 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 AC007998.5-201ENST00000622938 237 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 AC099506.2-201ENST00000623074 221 ntBASIC3.02□□□□□ -1.93
PKP4Q99569 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.02□□□□□ -1.93
PKP4Q99569 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PKP4Q99569 AC121333.1-201ENST00000567488 2709 ntBASIC3.01□□□□□ -1.93
PKP4Q99569 MAPK10-266ENST00000641066 6555 ntBASIC3.01□□□□□ -1.93
PKP4Q99569 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PKP4Q99569 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PKP4Q99569 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PKP4Q99569 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PKP4Q99569 SNORA63-201ENST00000363450 132 ntBASIC3.01□□□□□ -1.93
PKP4Q99569 U3.6-201ENST00000363622 211 ntBASIC3.01□□□□□ -1.93
PKP4Q99569 Y_RNA.378-201ENST00000365652 113 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms