Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.25□□□□□ -2.45
VPS13AQ96RL7 AC096531.1-201ENST00000419107 107 ntBASIC-0.25□□□□□ -2.45
VPS13AQ96RL7 AL590556.1-201ENST00000423231 483 ntBASIC-0.25□□□□□ -2.45
VPS13AQ96RL7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.25□□□□□ -2.45
VPS13AQ96RL7 AL049874.1-201ENST00000489560 388 ntBASIC-0.25□□□□□ -2.45
VPS13AQ96RL7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC-0.25□□□□□ -2.45
VPS13AQ96RL7 AC087685.1-201ENST00000587507 141 ntBASIC-0.25□□□□□ -2.45
VPS13AQ96RL7 MIR4320-201ENST00000636981 65 ntBASIC-0.25□□□□□ -2.45
VPS13AQ96RL7 MTATP6P23-201ENST00000440153 476 ntBASIC-0.26□□□□□ -2.45
VPS13AQ96RL7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.26□□□□□ -2.45
VPS13AQ96RL7 RNU6-272P-201ENST00000411028 104 ntBASIC-0.26□□□□□ -2.45
VPS13AQ96RL7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC-0.26□□□□□ -2.45
VPS13AQ96RL7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC-0.26□□□□□ -2.45
VPS13AQ96RL7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.26□□□□□ -2.45
VPS13AQ96RL7 AC021506.2-201ENST00000612354 169 ntBASIC-0.26□□□□□ -2.45
VPS13AQ96RL7 RNU6-968P-201ENST00000384076 107 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 Y_RNA.493-201ENST00000384422 102 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 HSPE1P9-201ENST00000440046 311 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 MIR3681-201ENST00000580089 72 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 uc_338.36-201ENST00000622331 158 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 RNU6-160P-201ENST00000384591 107 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 RNA5SP227-201ENST00000516184 113 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 AL450336.1-201ENST00000605180 586 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 AC008443.7-201ENST00000622195 246 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 Y_RNA.67-201ENST00000362870 100 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 AL353777.1-201ENST00000425552 326 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 MTATP6P9-201ENST00000515039 680 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 AC136618.2-201ENST00000575091 400 ntBASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC-0.27□□□□□ -2.45
VPS13AQ96RL7 AC069282.1-201ENST00000411911 526 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 AC112518.2-201ENST00000508565 425 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 OR8K4P-201ENST00000534608 872 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 AC093106.2-201ENST00000428212 385 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 SNORA68.3-201ENST00000515906 83 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 SNORA31.13-201ENST00000516624 135 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 MIR4431-201ENST00000579990 94 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 AL513534.2-201ENST00000603836 250 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 AC106791.2-201ENST00000604680 391 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 AC113194.1-201ENST00000606037 500 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 AL121992.2-201ENST00000606262 256 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 MIR4315-1-201ENST00000636800 73 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 MIR4315-2-201ENST00000640925 73 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 MTND5P32-201ENST00000560711 1802 ntBASIC-0.28□□□□□ -2.45
VPS13AQ96RL7 PNRC2P1-201ENST00000423940 420 ntBASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 AL354941.1-201ENST00000438600 464 ntBASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 ARPC3P5-201ENST00000448802 534 ntBASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 MIR587-201ENST00000384845 96 ntBASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 MIR1285-2-201ENST00000408311 88 ntBASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 AL353898.1-201ENST00000444055 238 ntBASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 ANKRD26P4-201ENST00000455755 950 ntBASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 AC022493.2-201ENST00000506122 481 ntBASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 AP003122.4-201ENST00000530980 758 ntBASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 AL590229.1-201ENST00000603497 542 ntBASIC-0.29□□□□□ -2.46
VPS13AQ96RL7 SNORD114-9-201ENST00000364370 72 ntBASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 AC243964.1-201ENST00000441814 261 ntBASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 AC114811.1-201ENST00000507207 168 ntBASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 AL357312.1-201ENST00000603879 298 ntBASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 AC004492.1-201ENST00000607036 742 ntBASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 AC097065.2-201ENST00000608159 533 ntBASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 AP001596.2-201ENST00000608410 312 ntBASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 RNU2-71P-201ENST00000411395 189 ntBASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC-0.3□□□□□ -2.46
VPS13AQ96RL7 MIR30A-201ENST00000385092 71 ntBASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 CETN4P-201ENST00000432407 469 ntBASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 U8.21-201ENST00000459536 136 ntBASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 PGBD4P5-201ENST00000445958 426 ntBASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 RNA5SP108-201ENST00000605921 117 ntBASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 AL138478.1-201ENST00000612252 832 ntBASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 AL591926.4-201ENST00000616895 298 ntBASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 AL596245.1-201ENST00000618994 362 ntBASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS13AQ96RL7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms