Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNU6-33P-201ENST00000384793 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 AL122016.1-201ENST00000403365 367 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 FTH1P15-201ENST00000406984 280 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 MTND1P23-201ENST00000416931 372 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 AC009161.1-201ENST00000417306 376 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC138Q96M89 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC138Q96M89 AL441985.1-201ENST00000457727 251 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 AC007547.1-201ENST00000462177 490 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 AC087884.1-201ENST00000469738 328 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RN7SL601P-201ENST00000471221 293 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 MRPL42P6-201ENST00000486397 371 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 AC083904.1-201ENST00000487828 231 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 GZMAP1-201ENST00000503054 631 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC138Q96M89 MRPS36P2-201ENST00000512569 299 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 SNORA19.2-201ENST00000516013 114 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 AC023050.3-201ENST00000541142 333 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC138Q96M89 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC138Q96M89 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC138Q96M89 AP001094.1-201ENST00000579805 193 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 AC024153.1-201ENST00000603103 365 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 APOOP1-201ENST00000604695 592 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 RNU6-6P-201ENST00000606623 107 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 AC006504.8-201ENST00000621046 635 ntBASIC3.35□□□□□ -1.87
CCDC138Q96M89 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC138Q96M89 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC138Q96M89 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC138Q96M89 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CCDC138Q96M89 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC138Q96M89 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC138Q96M89 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC138Q96M89 RNU6-858P-201ENST00000362436 107 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 RNU5E-7P-201ENST00000365290 117 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC138Q96M89 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC138Q96M89 AC097713.2-201ENST00000430199 356 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 AL353705.1-201ENST00000433468 480 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC138Q96M89 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC138Q96M89 AL117351.2-201ENST00000513571 157 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 RNU6-1069P-201ENST00000516612 133 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 SNORA64.4-201ENST00000516632 81 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC138Q96M89 RPL7P20-201ENST00000520308 745 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC138Q96M89 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 MIR4298-201ENST00000584380 73 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 AC011471.1-201ENST00000585766 187 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 AC060780.3-201ENST00000589464 80 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 BNIP3P25-201ENST00000596023 559 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC138Q96M89 AL121757.2-201ENST00000611223 313 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 AC100810.6-201ENST00000638068 285 ntBASIC3.34□□□□□ -1.87
CCDC138Q96M89 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC138Q96M89 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.88
CCDC138Q96M89 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC138Q96M89 AC017071.1-201ENST00000564407 2204 ntBASIC3.34□□□□□ -1.88
CCDC138Q96M89 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CCDC138Q96M89 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CCDC138Q96M89 MIR148B-201ENST00000362252 99 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 RNU6-748P-201ENST00000384648 107 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 MIR147B-201ENST00000390185 80 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC138Q96M89 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC138Q96M89 NDUFB4P5-201ENST00000415445 361 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 USP9YP20-201ENST00000419224 558 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC138Q96M89 AL365400.1-201ENST00000431854 640 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 HMGB1P31-201ENST00000437242 427 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 RPL23AP58-201ENST00000440453 469 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 RBMX2P4-201ENST00000441256 376 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 RNU7-138P-201ENST00000459479 64 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 AC107626.1-201ENST00000471084 183 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 AC117503.1-201ENST00000472241 394 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 RN7SL283P-201ENST00000489055 303 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 SEM1P1-201ENST00000506694 209 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC138Q96M89 SNORA43.2-201ENST00000516652 128 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC138Q96M89 AC107934.2-201ENST00000518653 310 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 AC087854.1-201ENST00000519706 414 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC138Q96M89 AP000763.2-201ENST00000540641 163 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC138Q96M89 CR383656.8-201ENST00000549046 145 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 AL133241.1-201ENST00000556832 487 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 OR1M4P-201ENST00000589199 287 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 AP000787.2-201ENST00000604432 568 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 RNU6-85P-201ENST00000605989 107 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 AL357078.3-201ENST00000607528 618 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 ATP5A1P2-202ENST00000616464 443 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC138Q96M89 FAM35CP-201ENST00000554755 2470 ntBASIC3.33□□□□□ -1.88
CCDC138Q96M89 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC138Q96M89 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC138Q96M89 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC138Q96M89 RNU4-35P-201ENST00000362588 141 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms