Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FTLP6-201ENST00000355274 422 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 RNU6-36P-201ENST00000384172 107 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 RNU6-16P-201ENST00000384385 107 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 RNU6-843P-201ENST00000384454 104 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 RNU6-15P-201ENST00000384534 107 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 SDHCP2-201ENST00000398565 501 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 SNORA11.1-201ENST00000408133 129 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 SNORA11F-201ENST00000408237 128 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 RN7SL132P-201ENST00000478131 296 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 RNA5SP143-201ENST00000516936 115 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 AC015726.2-201ENST00000620112 122 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 AC112200.1-201ENST00000625015 234 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.25□□□□□ -1.57
TRIM47Q96LD4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AL079305.1-201ENST00000623159 3008 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AC069528.2-201ENST00000624849 1991 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 MIR372-201ENST00000362225 67 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 RNU1-132P-201ENST00000364300 164 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 RNU6-20P-201ENST00000384106 107 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 LAP3P1-201ENST00000403648 294 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 RPS20P1-201ENST00000434853 354 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AL358232.1-201ENST00000448030 501 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AL591623.2-201ENST00000449978 222 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AL354710.1-201ENST00000453641 246 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 RPL21P13-201ENST00000488305 481 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 RNU6-567P-201ENST00000516746 107 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AC092470.1-201ENST00000546187 132 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AC103996.1-201ENST00000555468 102 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AC090877.1-201ENST00000561418 344 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AP000787.2-201ENST00000604432 568 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AL355816.1-201ENST00000607951 118 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AC107294.1-201ENST00000609524 467 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 RMST_4.1-201ENST00000616886 107 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AC068647.2-201ENST00000637380 353 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AC092593.1-201ENST00000515413 1815 ntBASIC5.24□□□□□ -1.57
TRIM47Q96LD4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM47Q96LD4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM47Q96LD4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM47Q96LD4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM47Q96LD4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 ZNF204P-201ENST00000416749 2397 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 RNA5SP361-201ENST00000362686 118 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 RNU6-1243P-201ENST00000364028 107 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 U8.6-201ENST00000364939 135 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 SNORD51-201ENST00000384320 80 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 AL160275.2-201ENST00000412010 394 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 AC099336.2-201ENST00000422457 254 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 RPS20P10-201ENST00000451209 253 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 AC099560.2-201ENST00000457554 255 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 RPS29P27-201ENST00000463711 170 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 RNU2-56P-201ENST00000516826 190 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 U7.2-201ENST00000607576 63 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 AC068831.7-201ENST00000616954 363 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 MIR6075-201ENST00000620782 95 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 AC007529.1-201ENST00000418574 2178 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 AC008555.8-201ENST00000623602 2168 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM47Q96LD4 MAPK10-303ENST00000641324 3959 ntBASIC5.23□□□□□ -1.57
TRIM47Q96LD4 SCN1A-220ENST00000641603 12506 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 MIR450A1-201ENST00000362262 91 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 RNU5E-7P-201ENST00000365290 117 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 RNA5SP283-201ENST00000365604 119 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 SNORD96B-201ENST00000386148 79 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 SNORD37.2-201ENST00000391075 66 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 SNORD56-201ENST00000413522 71 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 AL158823.1-201ENST00000418441 478 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 BTF3P11-201ENST00000426582 477 ntBASIC5.22□□□□□ -1.57
TRIM47Q96LD4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM47Q96LD4 snoU13.30-201ENST00000458951 104 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms