Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX27Q96L92 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SNX27Q96L92 MTATP6P23-201ENST00000440153 476 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 AC025465.4-201ENST00000513422 638 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX27Q96L92 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX27Q96L92 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SNX27Q96L92 AC011602.1-201ENST00000546484 331 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 HMGB1P14-201ENST00000557424 591 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX27Q96L92 MIR548S-201ENST00000581352 82 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX27Q96L92 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
SNX27Q96L92 AL590808.1-201ENST00000618696 141 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 AC006504.8-201ENST00000621046 635 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 DUXAP9-208ENST00000622815 614 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 AP003400.5-201ENST00000624827 617 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SNX27Q96L92 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX27Q96L92 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX27Q96L92 AC022336.2-201ENST00000568966 2538 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SNX27Q96L92 MTND4P35-201ENST00000604257 1375 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNX27Q96L92 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SNX27Q96L92 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNX27Q96L92 RNU6-270P-201ENST00000364131 105 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 Y_RNA.378-201ENST00000365652 113 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 RPS4XP7-201ENST00000406274 780 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 RNU4-26P-201ENST00000410270 107 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 RNU6-55P-201ENST00000411092 107 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 RNU6-954P-201ENST00000411355 107 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 ARL5AP1-201ENST00000418991 388 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 AL353678.1-201ENST00000422735 741 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX27Q96L92 AC009969.1-201ENST00000438726 172 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 MTCO2P3-201ENST00000442543 421 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX27Q96L92 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX27Q96L92 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX27Q96L92 RN7SL863P-201ENST00000462370 296 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 HMGN2P26-201ENST00000463169 339 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 RN7SL442P-201ENST00000473804 320 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 RPS4XP22-201ENST00000480755 780 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 AC022493.1-201ENST00000492984 337 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 AC114781.4-201ENST00000513707 639 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 AC025755.1-201ENST00000521306 278 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 CENPUP1-201ENST00000526649 1202 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 AC118273.2-201ENST00000532092 465 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX27Q96L92 AC107294.3-201ENST00000609211 526 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 DUSP12P1-201ENST00000612874 516 ntBASIC3.5□□□□□ -1.85
SNX27Q96L92 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
SNX27Q96L92 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX27Q96L92 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
SNX27Q96L92 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SNX27Q96L92 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNX27Q96L92 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SNX27Q96L92 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNX27Q96L92 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX27Q96L92 Y_RNA.160-201ENST00000363677 92 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 Y_RNA.373-201ENST00000365600 103 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 RNY3P14-201ENST00000384309 102 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 RNU6-1179P-201ENST00000384667 107 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 AC138393.2-201ENST00000414742 246 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 BX682237.1-201ENST00000415016 335 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 NDUFB4P5-201ENST00000415445 361 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX27Q96L92 AL360271.2-201ENST00000447710 161 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX27Q96L92 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX27Q96L92 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX27Q96L92 AC010401.1-201ENST00000463867 348 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 RPL21P93-201ENST00000480465 489 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 AC112206.3-201ENST00000514578 389 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 RNU2-69P-201ENST00000516061 100 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 AC009902.1-201ENST00000519351 183 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX27Q96L92 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.49□□□□□ -1.85
SNX27Q96L92 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX27Q96L92 AC012119.1-201ENST00000603184 222 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 AC092807.2-201ENST00000609367 243 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 U2.17-201ENST00000611454 95 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX27Q96L92 U6.42-201ENST00000618440 107 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SNX27Q96L92 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 AL136164.4-201ENST00000625013 2135 ntBASIC3.49□□□□□ -1.85
SNX27Q96L92 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNX27Q96L92 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNX27Q96L92 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX27Q96L92 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SNX27Q96L92 Y_RNA.122-201ENST00000363331 96 ntBASIC3.48□□□□□ -1.85
SNX27Q96L92 RNU6-82P-201ENST00000363970 107 ntBASIC3.48□□□□□ -1.85
SNX27Q96L92 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.48□□□□□ -1.85
SNX27Q96L92 DYNLT3P1-201ENST00000378574 347 ntBASIC3.48□□□□□ -1.85
SNX27Q96L92 AP002088.1-201ENST00000382740 395 ntBASIC3.48□□□□□ -1.85
SNX27Q96L92 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNX27Q96L92 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms