Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RNU6-512P-201ENST00000364438 103 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 Y_RNA.534-201ENST00000384599 112 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 MIR493-201ENST00000385254 89 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 AL645937.1-202ENST00000421799 937 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AL513185.2-201ENST00000425543 193 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AL669831.1-202ENST00000428504 417 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AL592045.1-201ENST00000429867 352 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 GTF2IP13-201ENST00000438487 386 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 RPS24P13-201ENST00000442520 397 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 SCARNA18-201ENST00000459004 134 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AP000852.1-201ENST00000472460 573 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 SNORA31.1-201ENST00000515993 133 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 SNORA31.5-201ENST00000516190 133 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 RNU6-1314P-201ENST00000517139 104 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 BTF3P12-201ENST00000519620 469 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 SCOCP1-201ENST00000554676 349 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 BNIP3P25-201ENST00000596023 559 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 CTHRC1P1-201ENST00000605383 469 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 AP002826.1-201ENST00000608835 315 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AC092807.2-201ENST00000609367 243 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AL359547.2-201ENST00000615810 418 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 uc_338.11-201ENST00000619132 160 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AC104985.2-201ENST00000620598 500 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 AP003400.5-201ENST00000624827 617 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 AC004944.1-201ENST00000517807 3059 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 MTND4P12-201ENST00000498999 1377 ntBASIC2.82□□□□□ -1.96
TM9SF4Q92544 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.82□□□□□ -1.96
TM9SF4Q92544 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TM9SF4Q92544 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TM9SF4Q92544 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 SNORA16.2-201ENST00000390991 127 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TM9SF4Q92544 AL592114.1-201ENST00000403842 483 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 RNA5SP111-201ENST00000411386 101 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 AL160275.3-201ENST00000423876 471 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 PRPS1P1-201ENST00000445305 876 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 RNU6-953P-201ENST00000459154 107 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 RNU7-66P-201ENST00000459469 62 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 RPL23AP11-201ENST00000475260 469 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 AC046134.1-201ENST00000514454 666 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 RNA5SP367-201ENST00000516557 118 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 RNU6-914P-201ENST00000516749 109 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 MTND4P7-201ENST00000523876 130 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 RAB11AP2-201ENST00000545905 639 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 BNIP3P6-201ENST00000549284 499 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 AC010653.1-201ENST00000571108 881 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 AC011712.1-201ENST00000588959 234 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 AC174048.1-201ENST00000603389 144 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 AL161798.1-201ENST00000604630 131 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 AC009248.2-201ENST00000619826 254 ntBASIC2.81□□□□□ -1.96
TM9SF4Q92544 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
TM9SF4Q92544 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TM9SF4Q92544 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
TM9SF4Q92544 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TM9SF4Q92544 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
TM9SF4Q92544 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TM9SF4Q92544 RNU6-1167P-201ENST00000363227 94 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 U3.12-201ENST00000364498 214 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 SNORA14A-201ENST00000364773 135 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 RNU6-715P-201ENST00000365204 103 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TM9SF4Q92544 SNORA32.2-201ENST00000384049 122 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 RNU6-767P-201ENST00000384132 107 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 SNORA26.7-201ENST00000391288 122 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.8□□□□□ -1.96
TM9SF4Q92544 RNU2-41P-201ENST00000410991 178 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.8□□□□□ -1.96
TM9SF4Q92544 AC007919.1-201ENST00000429380 217 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 HMGB1P27-201ENST00000431429 603 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 RPL21P2-201ENST00000440049 481 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.8□□□□□ -1.96
TM9SF4Q92544 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.8□□□□□ -1.96
TM9SF4Q92544 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.8□□□□□ -1.96
TM9SF4Q92544 RNU6-1208P-201ENST00000459588 107 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 AC087588.1-201ENST00000462203 316 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 RPS20P22-201ENST00000473700 357 ntBASIC2.8□□□□□ -1.96
TM9SF4Q92544 AP004217.1-201ENST00000480579 346 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms