Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC009901.1-201ENST00000506703 541 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 AC008526.1-201ENST00000509149 338 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 TBCAP3-201ENST00000512475 312 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 RN7SKP24-201ENST00000515888 284 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 RNU6-143P-201ENST00000516942 93 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 RNU6-1073P-201ENST00000517182 106 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.09□□□□□ -1.75
RTF1Q92541 AL121821.2-201ENST00000556081 394 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 AC078795.3-201ENST00000602913 472 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 AC012119.1-201ENST00000603184 222 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 AC098826.3-201ENST00000603823 466 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 AC005034.5-201ENST00000604219 466 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.09□□□□□ -1.75
RTF1Q92541 AL133215.3-201ENST00000609801 448 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 Y_RNA.812-201ENST00000610788 101 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 Y_RNA.784-201ENST00000613803 101 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 Y_RNA.787-201ENST00000616522 101 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 Y_RNA.780-201ENST00000617336 101 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 Y_RNA.801-201ENST00000619005 101 ntBASIC4.09□□□□□ -1.75
RTF1Q92541 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.09□□□□□ -1.75
RTF1Q92541 ZNF519P1-201ENST00000449011 1626 ntBASIC4.09□□□□□ -1.76
RTF1Q92541 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RTF1Q92541 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTF1Q92541 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTF1Q92541 RNU1-140P-201ENST00000365040 165 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
RTF1Q92541 SNORD116-29-201ENST00000384516 83 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
RTF1Q92541 MTCYBP4-201ENST00000401524 249 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 AL590004.1-201ENST00000405321 300 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 RPS4XP7-201ENST00000406274 780 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 RNU4-14P-201ENST00000410858 122 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RTF1Q92541 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.08□□□□□ -1.76
RTF1Q92541 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.08□□□□□ -1.76
RTF1Q92541 Z85995.1-201ENST00000415547 335 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.08□□□□□ -1.76
RTF1Q92541 RPS24P13-201ENST00000442520 397 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.08□□□□□ -1.76
RTF1Q92541 RPL31P13-201ENST00000484151 370 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 RPS27P27-201ENST00000498779 255 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.08□□□□□ -1.76
RTF1Q92541 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.08□□□□□ -1.76
RTF1Q92541 RNU6-1170P-201ENST00000515974 106 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 RNA5SP471-201ENST00000516971 106 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.08□□□□□ -1.76
RTF1Q92541 AC022080.3-201ENST00000544433 482 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.08□□□□□ -1.76
RTF1Q92541 AC093249.1-201ENST00000567049 203 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 MIR3186-201ENST00000577404 85 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 MIR548AC-201ENST00000585049 88 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 AL451007.1-201ENST00000595491 289 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 XIST_intron.1-201ENST00000619444 68 ntBASIC4.08□□□□□ -1.76
RTF1Q92541 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.08□□□□□ -1.76
RTF1Q92541 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTF1Q92541 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RTF1Q92541 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTF1Q92541 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTF1Q92541 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTF1Q92541 SNORA71.1-201ENST00000364523 117 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 Y_RNA.326-201ENST00000365176 113 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 MIR607-201ENST00000385241 96 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 MIR301A-201ENST00000385261 86 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 RNY4P36-201ENST00000391116 96 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 RPL21P90-201ENST00000415692 466 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 ATG3P1-201ENST00000419507 911 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.07□□□□□ -1.76
RTF1Q92541 AL592045.1-201ENST00000429867 352 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 BX679664.1-201ENST00000434429 253 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 HMGB3P8-201ENST00000449709 577 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.07□□□□□ -1.76
RTF1Q92541 RNU7-152P-201ENST00000458982 64 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 RN7SL330P-201ENST00000469709 307 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 AC117503.1-201ENST00000472241 394 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 AC005921.1-201ENST00000510589 286 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 RNU6-1315P-201ENST00000517187 99 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 AC009812.2-201ENST00000517657 457 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 AC087854.1-201ENST00000519706 414 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.07□□□□□ -1.76
RTF1Q92541 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.07□□□□□ -1.76
RTF1Q92541 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RTF1Q92541 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.07□□□□□ -1.76
RTF1Q92541 AL161798.1-201ENST00000604630 131 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.07□□□□□ -1.76
RTF1Q92541 AC090971.5-201ENST00000621102 293 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 AL359757.2-201ENST00000624309 274 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 AC048347.1-201ENST00000624621 427 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 Z99571.1-201ENST00000636677 394 ntBASIC4.07□□□□□ -1.76
RTF1Q92541 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTF1Q92541 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.07□□□□□ -1.76
RTF1Q92541 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RTF1Q92541 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RTF1Q92541 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RTF1Q92541 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RTF1Q92541 RNU6-562P-201ENST00000362731 107 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 Y_RNA.138-201ENST00000363462 102 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 RNU6-512P-201ENST00000364438 103 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 SNORA4.3-201ENST00000365564 137 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 RNU6-43P-201ENST00000384302 107 ntBASIC4.06□□□□□ -1.76
RTF1Q92541 Y_RNA.482-201ENST00000384377 111 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms