Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU5E-6P-201ENST00000365574 115 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-187P-201ENST00000384139 106 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-95P-201ENST00000384697 107 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 AL583834.1-201ENST00000406943 343 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 RNU4-46P-201ENST00000410818 138 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-55P-201ENST00000411092 107 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 AP000275.1-201ENST00000411943 390 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 USMG5P1-201ENST00000425964 177 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 USP9YP30-201ENST00000430729 455 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 UBE2V1P13-201ENST00000436983 439 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 AC016696.1-201ENST00000446949 318 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 FTH1P25-201ENST00000447665 469 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 AC009901.1-201ENST00000506703 541 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 AC104806.1-201ENST00000508720 308 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 AL121576.1-201ENST00000556055 276 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 COX6CP3-201ENST00000580869 223 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 AL031176.1-201ENST00000604554 466 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 uc_338.32-201ENST00000615087 172 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 AC022149.2-201ENST00000621061 203 ntBASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.05□□□□□ -1.76
SH3RF3Q8TEJ3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-1287P-201ENST00000362914 107 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.150-201ENST00000363562 102 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-1059P-201ENST00000363752 98 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.424-201ENST00000384063 103 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-1181P-201ENST00000384191 106 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-1060P-201ENST00000384664 107 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-713P-201ENST00000384761 107 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 AL136372.1-201ENST00000403060 228 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 MIR1302-6-201ENST00000408466 90 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 RNU2-14P-201ENST00000411053 191 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 Z99755.1-201ENST00000414048 380 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 AC063979.1-201ENST00000415539 377 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 RPL36AP6-201ENST00000435770 321 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 CYCSP32-201ENST00000440548 321 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 RPS29P31-201ENST00000446147 164 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 snoU13.8-201ENST00000458890 104 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 RPL39P38-201ENST00000467018 153 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 TBCAP3-201ENST00000512475 312 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-182P-201ENST00000516970 105 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 AC006557.5-201ENST00000603126 811 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 AC006254.3-201ENST00000603353 884 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 AL162713.1-201ENST00000604480 262 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 AL136313.1-201ENST00000624804 202 ntBASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
SH3RF3Q8TEJ3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 HSPA8P1-201ENST00000425843 1833 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.64-201ENST00000362845 102 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 RNU6-525P-201ENST00000363685 104 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 Y_RNA.462-201ENST00000384268 102 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 HMGN1P24-201ENST00000412282 298 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 AL137014.1-201ENST00000420490 1226 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 AC117503.1-201ENST00000472241 394 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 RN7SL504P-201ENST00000494496 287 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 PHBP14-201ENST00000512887 367 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 AP004371.1-201ENST00000525240 214 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 SETP7-201ENST00000552169 453 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 AC090615.1-201ENST00000577519 154 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 MTND4LP5-201ENST00000605152 292 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 MIR4272-201ENST00000635924 64 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 Z83843.1-201ENST00000604070 3685 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 AC103710.2-202ENST00000641454 2853 ntBASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SH3RF3Q8TEJ3 MAPK10-373ENST00000641983 6772 ntBASIC4.03□□□□□ -1.77
SH3RF3Q8TEJ3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SH3RF3Q8TEJ3 USP8P1-201ENST00000494673 3183 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms