Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 SNORD3E-201ENST00000362899 217 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 RNU6-799P-201ENST00000363567 107 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 Y_RNA.295-201ENST00000364918 102 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 MIR578-201ENST00000384828 96 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 SAR1AP2-201ENST00000392696 594 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 MIR1277-201ENST00000408536 78 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 MIR1261-201ENST00000408659 82 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 RNU6-387P-201ENST00000411331 105 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 USP9YP6-201ENST00000413550 854 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 MTCYBP5-201ENST00000423752 1135 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 SNRPEP9-201ENST00000436794 238 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 SEPT14P3-201ENST00000439401 183 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 AL732372.2-207ENST00000445840 183 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 NFU1P2-201ENST00000448700 469 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 FGF7P6-202ENST00000451282 293 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 SEPT14P2-201ENST00000453405 183 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 AC092798.1-201ENST00000458542 409 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 RNU7-180P-201ENST00000459240 63 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 MTCO3P38-201ENST00000468910 766 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 RN7SL283P-201ENST00000489055 303 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 MTAPP1-201ENST00000489154 819 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 RPS29P20-201ENST00000489592 171 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 EIF4EP3-201ENST00000498782 656 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 CCDC34P1-201ENST00000507441 517 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 MTND4LP22-201ENST00000508209 276 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 SEPT14P4-201ENST00000513445 186 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 AC009902.1-201ENST00000519351 183 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 FO082796.1-201ENST00000523795 183 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 AL133393.1-201ENST00000603277 287 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 FTX_3.1-201ENST00000610451 147 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 RMST_3.1-201ENST00000611651 109 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 AL590808.1-201ENST00000618696 141 ntBASIC2.12□□□□□ -2.07
LINC01006Q8NI28 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LINC01006Q8NI28 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 RNY3P3-201ENST00000363816 102 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 RNU6-884P-201ENST00000363889 107 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 RNU6-1283P-201ENST00000365314 105 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 DYNLT3P1-201ENST00000378574 347 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 RNU6-198P-201ENST00000384258 104 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 RNU6-1127P-201ENST00000384580 107 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 SNORD37.1-201ENST00000390968 65 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 RPL21P3-201ENST00000395517 478 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AL356057.3-201ENST00000402607 340 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 RNU2-29P-201ENST00000410423 189 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 RNU4-46P-201ENST00000410818 138 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 RNU2-68P-201ENST00000410878 191 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 OR9R1P-201ENST00000412200 877 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 NDUFB4P5-201ENST00000415445 361 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 MTND1P23-201ENST00000416931 372 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 MRPS10P2-201ENST00000431226 381 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AL591704.1-201ENST00000432574 275 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AL360271.2-201ENST00000447710 161 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 DPPA3P1-201ENST00000448050 469 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 RPL21P41-201ENST00000459863 264 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC146507.2-201ENST00000460608 476 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC128713.1-201ENST00000471495 306 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 BNIP3P6-201ENST00000549284 499 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AL138976.2-201ENST00000563989 694 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 NUTF2P8-201ENST00000604593 363 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 MTND4LP5-201ENST00000605152 292 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC104458.1-201ENST00000608243 463 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC004832.5-201ENST00000608677 401 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC073308.1-201ENST00000623696 305 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 SNORA50A-202ENST00000629536 136 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AC024614.3-201ENST00000637860 256 ntBASIC2.11□□□□□ -2.07
LINC01006Q8NI28 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms