Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC096745.1-201ENST00000509945 370 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 RNU6-678P-201ENST00000516832 109 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC136618.2-201ENST00000575091 400 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 MIR4782-201ENST00000577987 79 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 BCRP9-201ENST00000605312 388 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 NDUFA8P1-201ENST00000605525 367 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC092125.1-201ENST00000562568 1995 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 RNU1-57P-201ENST00000384491 166 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 CISD1P1-201ENST00000393907 327 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 RPS3AP37-201ENST00000419176 745 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 LARP1BP3-201ENST00000437229 869 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 EEF1A1P39-201ENST00000440791 250 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 AC108210.2-201ENST00000503681 201 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 FAM206BP-201ENST00000510179 541 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 AC010587.2-201ENST00000511727 448 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 AL356432.3-201ENST00000568952 465 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 U1.36-201ENST00000620684 176 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 AC099654.8-201ENST00000637757 681 ntBASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CLHC1Q8NHS4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AL356292.1-201ENST00000283110 373 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 RNU6-769P-201ENST00000384407 104 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 RNU6-278P-201ENST00000390945 109 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AL133475.1-201ENST00000404414 305 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 MIR1283-2-201ENST00000408621 87 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AL592045.1-201ENST00000429867 352 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 RPL7P54-201ENST00000438336 674 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AL117351.1-201ENST00000438864 766 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AC245102.2-201ENST00000448956 180 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 snoU13.23-201ENST00000458863 104 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AC104564.1-201ENST00000493028 407 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 MTND4P2-201ENST00000507767 1203 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 RNU6-667P-201ENST00000517186 102 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 BNIP3P9-201ENST00000603714 553 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AL670379.10-201ENST00000604330 253 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 AL670379.9-201ENST00000605428 253 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.59□□□□□ -2.15
CLHC1Q8NHS4 U8.3-201ENST00000363321 132 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 Y_RNA.534-201ENST00000384599 112 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 SNORA40C-201ENST00000391285 128 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 RPS12P24-201ENST00000412619 387 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 UBE2V1P4-201ENST00000425374 344 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AL591704.1-201ENST00000432574 275 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 NEFMP1-201ENST00000443423 1006 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 FCF1P6-201ENST00000456841 595 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 RNU6-572P-201ENST00000516724 80 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 RNU6-143P-201ENST00000516942 93 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 RNU6-548P-201ENST00000517083 115 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 MTND1P36-201ENST00000522384 936 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 MTND3P19-201ENST00000603825 345 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AC007363.1-201ENST00000604736 620 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AC016925.2-201ENST00000605108 242 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AL592221.1-201ENST00000605266 382 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AC097468.3-201ENST00000607956 456 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AC072039.2-201ENST00000608883 439 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AL355472.4-201ENST00000610233 626 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AC068944.2-201ENST00000610373 403 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AL359314.1-201ENST00000616913 261 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AC013437.2-201ENST00000639587 677 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 MTND4P23-201ENST00000447723 1363 ntBASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CLHC1Q8NHS4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 RNU6-898P-201ENST00000365627 104 ntBASIC1.57□□□□□ -2.16
CLHC1Q8NHS4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms