Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AL513124.1-201ENST00000450410 614 ntBASIC4.31□□□□□ -1.72
PHC3Q8NDX5 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.31□□□□□ -1.72
PHC3Q8NDX5 AC011276.1-201ENST00000469688 323 ntBASIC4.31□□□□□ -1.72
PHC3Q8NDX5 RNU6-397P-201ENST00000516226 104 ntBASIC4.31□□□□□ -1.72
PHC3Q8NDX5 AC109329.1-201ENST00000518744 317 ntBASIC4.31□□□□□ -1.72
PHC3Q8NDX5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.31□□□□□ -1.72
PHC3Q8NDX5 RPL23AP97-201ENST00000568955 471 ntBASIC4.31□□□□□ -1.72
PHC3Q8NDX5 AC090517.1-201ENST00000569307 266 ntBASIC4.31□□□□□ -1.72
PHC3Q8NDX5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.31□□□□□ -1.72
PHC3Q8NDX5 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.31□□□□□ -1.72
PHC3Q8NDX5 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.31□□□□□ -1.72
PHC3Q8NDX5 AC130454.1-201ENST00000622948 401 ntBASIC4.31□□□□□ -1.72
PHC3Q8NDX5 AC007546.2-201ENST00000623996 360 ntBASIC4.31□□□□□ -1.72
PHC3Q8NDX5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.31□□□□□ -1.72
PHC3Q8NDX5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PHC3Q8NDX5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PHC3Q8NDX5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PHC3Q8NDX5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PHC3Q8NDX5 Z75746.1-201ENST00000440243 2080 ntBASIC4.31□□□□□ -1.72
PHC3Q8NDX5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PHC3Q8NDX5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
PHC3Q8NDX5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AC009541.1-201ENST00000438279 2662 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AL672296.1-201ENST00000427780 2158 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 Y_RNA.19-201ENST00000362462 99 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 RNU6-379P-201ENST00000363813 104 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 RNU6-884P-201ENST00000363889 107 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 Z98749.2-208ENST00000381646 500 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 Y_RNA.405-201ENST00000383979 100 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 U1.1-201ENST00000384101 164 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 Y_RNA.451-201ENST00000384200 100 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 Y_RNA.524-201ENST00000384564 100 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 Y_RNA.561-201ENST00000384694 100 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 Z98941.1-201ENST00000407764 100 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 SNORA11F-201ENST00000408237 128 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 NDUFS5P4-201ENST00000412983 318 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 RPS29P17-201ENST00000430795 166 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 MTCO3P29-201ENST00000432119 779 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AC007389.2-201ENST00000434630 306 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 PHBP16-201ENST00000446318 950 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 HSPE1P20-201ENST00000538133 289 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 RPL23AP78-201ENST00000599928 470 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AC010201.1-201ENST00000605051 540 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 uc_338.13-201ENST00000618243 179 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AC011944.2-201ENST00000624440 683 ntBASIC4.3□□□□□ -1.72
PHC3Q8NDX5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PHC3Q8NDX5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 AC233263.6-201ENST00000631132 1963 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 Y_RNA.27-201ENST00000362540 103 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 RNU4-9P-201ENST00000364951 139 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 MIR518D-201ENST00000385014 87 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 RPL18P10-201ENST00000425606 538 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 RPL35AP15-201ENST00000468042 339 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 AC034236.1-201ENST00000469891 373 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 AC074250.1-201ENST00000511117 192 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 AC093840.1-201ENST00000511599 336 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 RNU6-897P-201ENST00000517135 105 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 MIR2355-201ENST00000517199 87 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 AC244505.7-201ENST00000599675 272 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 AC006557.5-201ENST00000603126 811 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.29□□□□□ -1.72
PHC3Q8NDX5 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PHC3Q8NDX5 AL138721.1-201ENST00000616756 179 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms