Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 UBE2L2-201ENST00000254302 429 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 RNY3P11-201ENST00000364153 102 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 Y_RNA.288-201ENST00000364854 92 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 Y_RNA.324-201ENST00000365165 102 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 RNU6-596P-201ENST00000365395 98 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 RNU6-1074P-201ENST00000383995 104 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 Y_RNA.447-201ENST00000384184 113 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 U3.39-201ENST00000408569 239 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 CYCSP33-201ENST00000414485 327 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 MTATP6P4-201ENST00000427725 675 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 AL592045.1-201ENST00000429867 352 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 DAP3P1-201ENST00000441522 278 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 RNU6-143P-201ENST00000516942 93 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 AC040926.1-201ENST00000530195 238 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 AC005476.1-201ENST00000554427 397 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 AC125232.2-201ENST00000592457 143 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 AC078899.3-201ENST00000599065 212 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 MTND4LP5-201ENST00000605152 292 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 BRDTP1-201ENST00000605735 677 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 AC078938.1-201ENST00000620993 318 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 AL353748.2-201ENST00000622148 471 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00116Q8NCU8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 RNY1P16-201ENST00000363063 111 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 RNU4-42P-201ENST00000364738 142 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 RNU6-933P-201ENST00000384424 107 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 RNU2-3P-201ENST00000410144 191 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 RNU6-325P-201ENST00000411132 105 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 AL353621.1-201ENST00000418219 243 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 OR2AQ1P-201ENST00000451972 200 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 AC133473.1-201ENST00000455173 299 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 RN7SL594P-201ENST00000470590 287 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 AC084357.1-201ENST00000473404 255 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 SUMO2P6-201ENST00000505273 288 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 AC008716.1-201ENST00000511084 513 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 AC113155.1-201ENST00000511141 769 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 APOOP4-201ENST00000513530 597 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 RNU6-408P-201ENST00000515910 100 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 RNU6-927P-201ENST00000516199 100 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 SNORA40.14-201ENST00000516543 86 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 SNORD84-203ENST00000584275 78 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 AL109918.3-201ENST00000603072 338 ntBASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LINC00116Q8NCU8 MFSD8-233ENST00000641482 4860 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AC009812.4-201ENST00000569134 1805 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 RNU6-512P-201ENST00000364438 103 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 Y_RNA.461-201ENST00000384263 103 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 RPL21P1-201ENST00000399532 476 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AL138885.1-201ENST00000405921 675 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AC025750.2-201ENST00000442609 450 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 IFNWP4-201ENST00000453148 294 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 MTCO3P8-201ENST00000453691 755 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 FO393415.2-201ENST00000480085 343 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AC097462.2-201ENST00000504623 481 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 HMGB1P50-201ENST00000605814 607 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AC138627.2-201ENST00000624202 601 ntBASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LINC00116Q8NCU8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms