Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 NUTF2P8-201ENST00000604593 363 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 AC004852.3-201ENST00000614131 326 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 U4.5-201ENST00000617137 123 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 AC026585.1-201ENST00000619582 524 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 AL691447.3-201ENST00000635020 330 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
USP38Q8NB14 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.29□□□□□ -1.88
USP38Q8NB14 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
USP38Q8NB14 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
USP38Q8NB14 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
USP38Q8NB14 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
USP38Q8NB14 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
USP38Q8NB14 NACAP2-201ENST00000318548 624 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
USP38Q8NB14 SNORA51.4-201ENST00000364993 124 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 RNU6-903P-201ENST00000391270 109 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 RPL7P10-201ENST00000417407 739 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.28□□□□□ -1.88
USP38Q8NB14 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.28□□□□□ -1.88
USP38Q8NB14 SKA2P1-201ENST00000425592 390 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.28□□□□□ -1.88
USP38Q8NB14 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.28□□□□□ -1.88
USP38Q8NB14 IFNA11P-201ENST00000446352 526 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 WASF1P1-201ENST00000447560 1131 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 AC073415.1-201ENST00000449240 153 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.28□□□□□ -1.88
USP38Q8NB14 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.28□□□□□ -1.88
USP38Q8NB14 snoU13.23-201ENST00000458863 104 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 RNU6-261P-201ENST00000459506 102 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 SNORA31.21-201ENST00000517180 77 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 AC009902.1-201ENST00000519351 183 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.28□□□□□ -1.88
USP38Q8NB14 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.28□□□□□ -1.88
USP38Q8NB14 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.28□□□□□ -1.88
USP38Q8NB14 OR5AQ1P-201ENST00000527596 927 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
USP38Q8NB14 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.28□□□□□ -1.88
USP38Q8NB14 BNIP3P6-201ENST00000549284 499 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 HIF1AP1-201ENST00000553642 175 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
USP38Q8NB14 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.28□□□□□ -1.88
USP38Q8NB14 MIR5692A1-201ENST00000580523 69 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.28□□□□□ -1.88
USP38Q8NB14 AL355598.1-201ENST00000604169 202 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 AP001486.3-201ENST00000615334 372 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 U6.42-201ENST00000618440 107 ntBASIC3.28□□□□□ -1.88
USP38Q8NB14 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.28□□□□□ -1.88
USP38Q8NB14 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.27□□□□□ -1.89
USP38Q8NB14 AC073325.2-201ENST00000339545 159 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 MIR578-201ENST00000384828 96 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
USP38Q8NB14 AL606923.1-201ENST00000406616 190 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 AL645937.1-202ENST00000421799 937 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 MTCYBP5-201ENST00000423752 1135 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 MTCO1P20-201ENST00000425366 358 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 AL714022.1-201ENST00000439897 151 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.27□□□□□ -1.89
USP38Q8NB14 AC092989.1-201ENST00000481235 277 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
USP38Q8NB14 AC009901.1-201ENST00000506703 541 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 AC114786.4-201ENST00000508771 728 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
USP38Q8NB14 AC008549.1-201ENST00000512900 643 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.27□□□□□ -1.89
USP38Q8NB14 RNA5SP385-201ENST00000515947 110 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 RNA5SP24-201ENST00000516478 95 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.27□□□□□ -1.89
USP38Q8NB14 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
USP38Q8NB14 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.27□□□□□ -1.89
USP38Q8NB14 AP005435.4-201ENST00000529514 284 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.27□□□□□ -1.89
USP38Q8NB14 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.27□□□□□ -1.89
USP38Q8NB14 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.27□□□□□ -1.89
USP38Q8NB14 MIR4782-201ENST00000577987 79 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.27□□□□□ -1.89
USP38Q8NB14 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.27□□□□□ -1.89
USP38Q8NB14 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.27□□□□□ -1.89
USP38Q8NB14 AC090517.2-201ENST00000614966 680 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 AC010338.1-201ENST00000621823 717 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
USP38Q8NB14 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
USP38Q8NB14 AL354685.2-201ENST00000448218 1447 ntBASIC3.27□□□□□ -1.89
USP38Q8NB14 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USP38Q8NB14 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
USP38Q8NB14 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
USP38Q8NB14 RNU6-778P-201ENST00000363269 103 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 RNU6-715P-201ENST00000365204 103 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 Y_RNA.402-201ENST00000383972 102 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 RNU6-648P-201ENST00000410190 107 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 RN7SKP58-201ENST00000411010 305 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 EEF1A1P40-201ENST00000412883 573 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 RPL26P27-201ENST00000414397 437 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.26□□□□□ -1.89
USP38Q8NB14 SAR1AP4-201ENST00000429225 591 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.26□□□□□ -1.89
USP38Q8NB14 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.26□□□□□ -1.89
USP38Q8NB14 AL583843.1-201ENST00000456070 346 ntBASIC3.26□□□□□ -1.89
USP38Q8NB14 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.26□□□□□ -1.89
USP38Q8NB14 RNU7-23P-201ENST00000459465 62 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms