Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 MIR412-201ENST00000362142 91 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 RNU6-596P-201ENST00000365395 98 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 Y_RNA.364-201ENST00000365532 101 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 Y_RNA.527-201ENST00000384573 102 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 RNU6-325P-201ENST00000411132 105 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AL096701.2-201ENST00000416920 238 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AL139247.1-201ENST00000422768 325 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 MRPS18CP6-201ENST00000423587 223 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AL356867.1-201ENST00000429623 299 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AC007389.2-201ENST00000434630 306 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 HMGB3P30-201ENST00000457863 606 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 KC877373.1-201ENST00000479066 408 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AC018437.1-201ENST00000492214 406 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AC139453.3-201ENST00000493276 369 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 ATP5F1P5-201ENST00000526403 760 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 HMGB1P14-201ENST00000557424 591 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AC109446.1-201ENST00000566172 220 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AC104695.3-201ENST00000604052 296 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AP002826.1-201ENST00000608835 315 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AL591516.1-201ENST00000611326 274 ntBASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PNLDC1Q8NA58 AF127577.6-201ENST00000623352 2191 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 RNU1-115P-201ENST00000365329 160 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 RNU6-741P-201ENST00000383889 107 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 SNORA40C-201ENST00000391285 128 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 MTHFD2P2-201ENST00000407725 247 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 MIR1290-201ENST00000408735 78 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AC096664.2-201ENST00000411843 406 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 HMGB3P2-201ENST00000411913 584 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 RPS15AP6-201ENST00000420703 385 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 BX276092.3-201ENST00000424182 230 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AC007919.1-201ENST00000429380 217 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 HMGB1P12-201ENST00000438594 598 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 SNORA71B-202ENST00000439232 272 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AC011816.1-201ENST00000441346 546 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 PIGFP3-201ENST00000441918 722 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 PCMTD1P1-201ENST00000455560 355 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AL583843.1-201ENST00000456070 346 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 MTATP8P1-201ENST00000467115 207 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 SNRPGP3-201ENST00000469405 227 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 RPL21P13-201ENST00000488305 481 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 RNU6-764P-201ENST00000516396 105 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 RNA5SP290-201ENST00000517133 127 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AC025755.1-201ENST00000521306 278 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 COX6CP5-201ENST00000527162 228 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 TRAV28-201ENST00000557548 323 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 SUB1P3-201ENST00000564581 315 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AC010653.1-201ENST00000571108 881 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 MIR4425-201ENST00000580572 84 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 MIR4503-201ENST00000582187 83 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AC136601.2-201ENST00000604356 474 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AL121917.1-203ENST00000605534 577 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 SNORA62.6-201ENST00000606322 83 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AC005014.2-201ENST00000607795 599 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 MIR8058-201ENST00000615737 89 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AL132822.1-201ENST00000617063 513 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AL162373.1-201ENST00000620433 407 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 Z69720.2-201ENST00000624755 279 ntBASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PNLDC1Q8NA58 AL161912.2-201ENST00000565707 3007 ntBASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 RNU6-37P-201ENST00000362692 107 ntBASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 Y_RNA.80-201ENST00000362996 102 ntBASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 RNU6-11P-201ENST00000364234 107 ntBASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 RNU6-7-201ENST00000364784 107 ntBASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 RNU6-8-201ENST00000365467 107 ntBASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 RNU6-25P-201ENST00000383873 107 ntBASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 RNU6-1-201ENST00000383898 107 ntBASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 RNU6-48P-201ENST00000384161 107 ntBASIC3.19□□□□□ -1.9
PNLDC1Q8NA58 RNU6-36P-201ENST00000384172 107 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms