Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC003071.1-201ENST00000451219 789 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 RPL23AP35-201ENST00000451906 501 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 KATNBL1P6-201ENST00000453433 915 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 SSXP1-201ENST00000453640 473 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 RPL23AP3-201ENST00000453844 468 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 SNORD97-201ENST00000459187 142 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 SNORA25.15-201ENST00000516487 89 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 MTCYBP23-201ENST00000558717 1102 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 AC233702.2-202ENST00000562547 291 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 AC136618.2-201ENST00000575091 400 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 MIR4299-201ENST00000577899 72 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 MIR544B-201ENST00000582372 78 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 AC243960.4-201ENST00000600532 288 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 AC091965.4-201ENST00000607691 587 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 AL356596.1-201ENST00000624230 379 ntBASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.47□□□□□ -2.17
ZIC4Q8N9L1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.46□□□□□ -2.17
ZIC4Q8N9L1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 RNU4-68P-201ENST00000364314 141 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AL356432.1-201ENST00000405809 419 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 RNA5SP450-201ENST00000411206 102 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 RPS20P15-201ENST00000412792 311 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AL158823.1-201ENST00000418441 478 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 TIMM9P1-201ENST00000436122 256 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 MTND6P13-201ENST00000443510 523 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 FDX1P2-201ENST00000450769 375 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 HMGN2P23-201ENST00000456759 269 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 MTND1P3-201ENST00000484956 952 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AP004247.1-201ENST00000531556 1289 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 OR5B19P-201ENST00000531766 928 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 OR5AL2P-201ENST00000532185 920 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AC013828.2-201ENST00000532487 235 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AC104984.5-201ENST00000586878 94 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AC010928.2-201ENST00000588017 287 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 KC877982.1-201ENST00000602313 470 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 AC069431.2-201ENST00000604149 1099 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 MIR502-201ENST00000606349 86 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 MIR7843-201ENST00000622274 79 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 MTND5P42-201ENST00000637720 498 ntBASIC1.46□□□□□ -2.18
ZIC4Q8N9L1 RNY4P24-201ENST00000362735 96 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 SNORD114-19-201ENST00000363072 75 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 MIR518A2-201ENST00000384966 87 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 MIR518D-201ENST00000385014 87 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 SNORA40C-201ENST00000391285 128 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 RNU2-62P-201ENST00000410868 191 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AL591704.1-201ENST00000432574 275 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 IFNA20P-201ENST00000436840 528 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 MTND3P1-201ENST00000441336 220 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AC012308.1-201ENST00000451232 178 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 snoU109.1-201ENST00000459339 135 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AC091965.2-201ENST00000512324 613 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 RNU6-677P-201ENST00000516914 101 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 NDUFA5P6-201ENST00000542110 379 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 DEFB122-202ENST00000569013 197 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 VN1R82P-201ENST00000601481 356 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 BCRP9-201ENST00000605312 388 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AC080013.3-201ENST00000606839 578 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AL355472.4-201ENST00000610233 626 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AC097478.2-201ENST00000610572 514 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 MIR6715A-201ENST00000615929 79 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 AL589994.2-201ENST00000621124 579 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ZIC4Q8N9L1 RNU4-92P-201ENST00000363783 136 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 RNA5SP190-201ENST00000365222 118 ntBASIC1.44□□□□□ -2.18
ZIC4Q8N9L1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms