Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC006386.2-201ENST00000624491 75 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AC012005.1-201ENST00000624575 75 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AL365361.1-201ENST00000566942 3481 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC008264.2-201ENST00000610193 3731 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 RNU6-522P-201ENST00000364497 107 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 SNORA54-201ENST00000384281 123 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 RNU6-166P-201ENST00000384371 107 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 RNU6-658P-201ENST00000384606 106 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 SNORD67-201ENST00000390833 111 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 U3.26-201ENST00000391236 204 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 RPL5P18-201ENST00000406671 891 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 Y_RNA.615-201ENST00000410769 117 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 RPL7P10-201ENST00000417407 739 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC244505.4-201ENST00000434905 287 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 HIGD1AP11-201ENST00000438361 280 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 SSXP5-201ENST00000443473 287 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AL583843.1-201ENST00000456070 346 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 RNU7-23P-201ENST00000459465 62 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 DYNLL1P5-201ENST00000467158 270 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AL049873.1-201ENST00000480540 376 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC018710.1-201ENST00000506509 158 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 MIR892C-201ENST00000516410 77 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 SNORD59.2-201ENST00000516873 68 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 RN7SKP272-201ENST00000516988 232 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 SCARNA20.6-201ENST00000517251 106 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC090115.3-201ENST00000553218 849 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 LARP7P3-201ENST00000579888 337 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 VN1R80P-201ENST00000597126 338 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC092747.3-201ENST00000603769 301 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 MTND4LP5-201ENST00000605152 292 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC004852.3-201ENST00000614131 326 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AL161629.2-201ENST00000615347 275 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 RMST_4.1-201ENST00000616886 107 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC103705.1-201ENST00000619013 241 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 DUXAP9-208ENST00000622815 614 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AP003122.6-201ENST00000623831 495 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 MIR622-201ENST00000638396 96 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 AC121333.1-201ENST00000567488 2709 ntBASIC2.86□□□□□ -1.95
BEST3Q8N1M1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 SNORD3E-201ENST00000362899 217 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 Y_RNA.88-201ENST00000363029 99 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 Y_RNA.100-201ENST00000363141 102 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 SNORA71.1-201ENST00000364523 117 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 SNORA14A-201ENST00000364773 135 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 Y_RNA.373-201ENST00000365600 103 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 DYNLT3P1-201ENST00000378574 347 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 SNORA44-201ENST00000384584 132 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 MT-TL1-201ENST00000386347 75 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 RNA5SP219-201ENST00000390940 113 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 RNU6-876P-201ENST00000391295 104 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 AL356057.2-201ENST00000403318 432 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 AL356776.1-201ENST00000406574 447 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 RNU2-3P-201ENST00000410144 191 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 COTL1P1-201ENST00000422309 375 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 TRIAP1P1-201ENST00000427062 225 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 AL031183.1-201ENST00000457667 207 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 AC007547.1-201ENST00000462177 490 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 AC011005.2-201ENST00000487324 359 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 RPS27AP10-201ENST00000496103 208 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 AC114786.4-201ENST00000508771 728 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 LINC00933-203ENST00000559812 219 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 AC018638.8-201ENST00000588755 281 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 AC009033.1-201ENST00000624279 431 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 AC100810.6-201ENST00000638068 285 ntBASIC2.85□□□□□ -1.95
BEST3Q8N1M1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
BEST3Q8N1M1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms