Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNA5SP126-201ENST00000365092 109 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 MIR676-201ENST00000390702 67 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 SNORA40C-201ENST00000391285 128 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 RNA5SP270-201ENST00000411361 118 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 USP9YP6-201ENST00000413550 854 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 RPS15AP12-201ENST00000419498 388 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AL591212.2-201ENST00000433923 257 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 ZNF114P1-201ENST00000453500 292 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AL139824.2-201ENST00000458731 1095 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 RNU6-953P-201ENST00000459154 107 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AP001324.2-201ENST00000461163 319 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 RPS3AP22-201ENST00000488297 769 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 RPS29P21-201ENST00000496272 170 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 FAM92A1P2-202ENST00000504766 877 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 RNU2-10P-201ENST00000516375 211 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 RNU6-572P-201ENST00000516724 80 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 RNU2-19P-201ENST00000517288 84 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 OR5B19P-201ENST00000531766 928 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AL353778.1-201ENST00000603149 408 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AC174048.1-201ENST00000603389 144 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AC012493.3-201ENST00000604494 112 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 uc_338.14-201ENST00000613162 166 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AC010678.1-201ENST00000614118 713 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 AC027807.2-201ENST00000616099 408 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 U6.99-201ENST00000637524 83 ntBASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC65Q8IXS2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 RNU6-166P-201ENST00000384371 107 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AC010099.3-201ENST00000423896 409 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 PTGES3P4-201ENST00000426243 356 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AC124916.1-201ENST00000444020 547 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AC080013.2-201ENST00000460866 323 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AC005178.1-201ENST00000508392 440 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 SNORA3.4-201ENST00000515969 96 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 RN7SKP287-201ENST00000516546 266 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 RNU6-1315P-201ENST00000517187 99 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 ZNF321P-202ENST00000550843 495 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 MIR3935-201ENST00000583472 104 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AP002360.4-201ENST00000606980 481 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 MIR15A-201ENST00000607334 83 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AC023510.2-201ENST00000622162 746 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AP002791.1-201ENST00000623291 381 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 PISRT1-201ENST00000626175 531 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 AL512643.1-201ENST00000635735 524 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 MIR7157-201ENST00000635801 60 ntBASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
CCDC65Q8IXS2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 RNU1-72P-201ENST00000362976 153 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 RNA5SP125-201ENST00000364843 120 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 RNU6-898P-201ENST00000365627 104 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 RNU6-19P-201ENST00000384718 107 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AL079342.1-201ENST00000401460 267 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 RNU2-20P-201ENST00000410425 191 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AC003685.2-201ENST00000422795 395 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AC007283.2-201ENST00000424739 197 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 FABP5P14-201ENST00000437273 393 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AL451074.3-201ENST00000437709 472 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 RPS15AP9-201ENST00000439856 381 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AC007182.2-201ENST00000489251 402 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 MTCYBP35-201ENST00000503630 1137 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AC116655.1-201ENST00000508324 901 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 SNORA31.19-201ENST00000517079 126 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 LINC00933-203ENST00000559812 219 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 MIR4287-201ENST00000579398 78 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 WISP1-OT1-201ENST00000602893 642 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AL022161.1-201ENST00000604390 213 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 AC093424.1-201ENST00000604999 338 ntBASIC2.11□□□□□ -2.07
CCDC65Q8IXS2 RNU6-87P-201ENST00000607561 108 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms