Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 HSPE1P7-201ENST00000604681 321 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 Y_RNA.276-201ENST00000364732 109 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 RNU1-100P-201ENST00000365255 165 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 RNA5SP171-201ENST00000391071 115 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 RNU6-1093P-201ENST00000391194 107 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AL138885.1-201ENST00000405921 675 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AP000275.1-201ENST00000411943 390 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 RPS29P7-201ENST00000439662 171 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 snoU13.28-201ENST00000459235 104 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AP002884.2-201ENST00000471647 395 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 NDUFB4P9-201ENST00000511646 388 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 RNU6-570P-201ENST00000517051 105 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AC144568.1-201ENST00000520139 137 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AC006064.5-201ENST00000541782 248 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AC004584.2-201ENST00000570407 410 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AC020895.1-201ENST00000595362 272 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AC068254.2-201ENST00000623938 3577 ntBASIC4.57□□□□□ -1.68
NPAS4Q8IUM7 AL731532.2-201ENST00000623542 1953 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 Y_RNA.19-201ENST00000362462 99 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 RNU6-770P-201ENST00000363929 105 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 RNU6-270P-201ENST00000364131 105 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 SNORD116-20-201ENST00000384529 92 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 Y_RNA.533-201ENST00000384596 114 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 SNORA19-201ENST00000384737 128 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 AL590135.1-201ENST00000422215 156 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 AC139712.2-201ENST00000424302 339 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 HMGN2P10-201ENST00000448085 265 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 RNU7-169P-201ENST00000459456 61 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 RNU6-111P-201ENST00000517179 105 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 AC091144.1-201ENST00000519573 138 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 AC090517.1-201ENST00000569307 266 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 AC006600.1-201ENST00000572529 153 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 MIR4444-1-201ENST00000581696 74 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 MIR4444-2-201ENST00000584390 74 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.56□□□□□ -1.68
NPAS4Q8IUM7 MAPK10-303ENST00000641324 3959 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 RNU6-200P-201ENST00000364743 107 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 RNU1-44P-201ENST00000384453 163 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 Y_RNA.551-201ENST00000384661 102 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 MIR670-201ENST00000390142 98 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 MTCYBP2-201ENST00000407745 171 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 MIR1911-201ENST00000410783 80 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 RPL36AP10-201ENST00000421785 322 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 BPY2DP-201ENST00000422208 265 ntBASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.55□□□□□ -1.68
NPAS4Q8IUM7 RPS29P19-201ENST00000479709 171 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms