Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TBCAP3-201ENST00000512475 312 ntBASIC3.31□□□□□ -1.88
RFX6Q8HWS3 SNORA14.1-201ENST00000516113 141 ntBASIC3.31□□□□□ -1.88
RFX6Q8HWS3 RNA5SP290-201ENST00000517133 127 ntBASIC3.31□□□□□ -1.88
RFX6Q8HWS3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX6Q8HWS3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX6Q8HWS3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX6Q8HWS3 MIR3942-201ENST00000585264 109 ntBASIC3.31□□□□□ -1.88
RFX6Q8HWS3 AC012119.1-201ENST00000603184 222 ntBASIC3.31□□□□□ -1.88
RFX6Q8HWS3 uc_338.25-201ENST00000613756 156 ntBASIC3.31□□□□□ -1.88
RFX6Q8HWS3 uc_338.15-201ENST00000615470 191 ntBASIC3.31□□□□□ -1.88
RFX6Q8HWS3 AC006133.1-201ENST00000617106 264 ntBASIC3.31□□□□□ -1.88
RFX6Q8HWS3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.31□□□□□ -1.88
RFX6Q8HWS3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.31□□□□□ -1.88
RFX6Q8HWS3 AL133216.2-202ENST00000634512 349 ntBASIC3.31□□□□□ -1.88
RFX6Q8HWS3 MAPK10-362ENST00000641864 4484 ntBASIC3.31□□□□□ -1.88
RFX6Q8HWS3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 AL079305.1-201ENST00000623159 3008 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 RNU6-254P-201ENST00000363377 107 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 MIR493-201ENST00000385254 89 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 Y_RNA.632-201ENST00000459189 102 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 KC877373.1-201ENST00000479066 408 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 AC009901.1-201ENST00000506703 541 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 AC079140.5-201ENST00000507882 310 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 SNORA67.7-201ENST00000516664 135 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 RNU6-256P-201ENST00000516747 97 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 RNU6-273P-201ENST00000516937 96 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 CYCSP27-201ENST00000527643 293 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 TRAV28-201ENST00000557548 323 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 MIR1273C-201ENST00000578669 77 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 MIR2682-201ENST00000580305 110 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 AL121655.1-201ENST00000605811 308 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.3□□□□□ -1.88
RFX6Q8HWS3 AL049781.1-201ENST00000623195 3585 ntBASIC3.3□□□□□ -1.88
RFX6Q8HWS3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AC007785.2-201ENST00000598627 1916 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 SNORD42.2-201ENST00000365570 69 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 RNU6-395P-201ENST00000365662 106 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 Y_RNA.384-201ENST00000383909 102 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 MIR578-201ENST00000384828 96 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 MIR606-201ENST00000384851 96 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 SNORA75.4-201ENST00000391278 119 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 RPL23AP69-201ENST00000431134 458 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AL159987.2-201ENST00000432754 307 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 FABP5P15-201ENST00000453566 214 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 RNA5SP310-201ENST00000459084 116 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AL157871.3-201ENST00000557231 293 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AC093249.1-201ENST00000567049 203 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 AC134503.1-201ENST00000633048 54 ntBASIC3.29□□□□□ -1.88
RFX6Q8HWS3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFX6Q8HWS3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 MIR148B-201ENST00000362252 99 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 Y_RNA.33-201ENST00000362591 102 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 U3.6-201ENST00000363622 211 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 MIR450B-201ENST00000401182 78 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AC097713.2-201ENST00000430199 356 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AL360271.2-201ENST00000447710 161 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.28□□□□□ -1.88
RFX6Q8HWS3 SNORD19B-201ENST00000459623 84 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 RPS27P29-201ENST00000463110 252 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 AC104472.2-201ENST00000469035 601 ntBASIC3.28□□□□□ -1.88
RFX6Q8HWS3 RPL7P43-201ENST00000478876 753 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms