Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 SNORD46.1-201ENST00000364139 104 ntBASIC0.03□□□□□ -2.4
LINC00643Q86TS7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.03□□□□□ -2.4
LINC00643Q86TS7 RPL22P22-201ENST00000395439 379 ntBASIC0.03□□□□□ -2.4
LINC00643Q86TS7 RNU4-62P-201ENST00000410125 130 ntBASIC0.03□□□□□ -2.4
LINC00643Q86TS7 HMGN1P14-201ENST00000412459 517 ntBASIC0.03□□□□□ -2.4
LINC00643Q86TS7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.03□□□□□ -2.4
LINC00643Q86TS7 AC108059.3-201ENST00000456388 214 ntBASIC0.03□□□□□ -2.4
LINC00643Q86TS7 AC092451.2-201ENST00000538746 658 ntBASIC0.03□□□□□ -2.4
LINC00643Q86TS7 TRAV32-201ENST00000553993 340 ntBASIC0.03□□□□□ -2.4
LINC00643Q86TS7 KATNBL1P5-201ENST00000605015 517 ntBASIC0.03□□□□□ -2.4
LINC00643Q86TS7 AC117490.2-201ENST00000610042 594 ntBASIC0.03□□□□□ -2.4
LINC00643Q86TS7 AC130324.3-201ENST00000614165 542 ntBASIC0.03□□□□□ -2.4
LINC00643Q86TS7 uc_338.15-201ENST00000615470 191 ntBASIC0.03□□□□□ -2.4
LINC00643Q86TS7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 MIR942-201ENST00000401111 86 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 AL121978.1-201ENST00000402778 359 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.02□□□□□ -2.41
LINC00643Q86TS7 LUZP4P1-201ENST00000415420 344 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 RPS15AP12-201ENST00000419498 388 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 AC002429.1-201ENST00000437672 148 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.02□□□□□ -2.41
LINC00643Q86TS7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.02□□□□□ -2.41
LINC00643Q86TS7 RNA5SP255-201ENST00000516370 107 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 RN7SKP265-201ENST00000516448 223 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 AP003392.2-201ENST00000527269 208 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
LINC00643Q86TS7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.02□□□□□ -2.41
LINC00643Q86TS7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.02□□□□□ -2.41
LINC00643Q86TS7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.02□□□□□ -2.41
LINC00643Q86TS7 SNORD39.3-201ENST00000584451 71 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.02□□□□□ -2.41
LINC00643Q86TS7 AC009237.15-201ENST00000610252 501 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 AC068787.1-201ENST00000623908 691 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.02□□□□□ -2.41
LINC00643Q86TS7 MIR5087-201ENST00000635826 76 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 GDI2P1-201ENST00000429312 1336 ntBASIC0.02□□□□□ -2.41
LINC00643Q86TS7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.02□□□□□ -2.41
LINC00643Q86TS7 Y_RNA.99-201ENST00000363138 105 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 RNU6-546P-201ENST00000383991 107 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 MIR491-201ENST00000384877 84 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
LINC00643Q86TS7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 MTCYBP38-201ENST00000417160 1123 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC093422.3-201ENST00000428506 305 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 C8orf59P1-201ENST00000429930 303 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.01□□□□□ -2.41
LINC00643Q86TS7 MTND2P4-201ENST00000445034 1004 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AL096829.2-201ENST00000446582 742 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 MTND5P8-201ENST00000449817 1083 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC010486.1-201ENST00000511793 424 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AL590705.4-201ENST00000532209 134 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC011604.1-201ENST00000545978 196 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC004217.3-201ENST00000551552 878 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC011374.2-201ENST00000607135 526 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AL355802.4-201ENST00000607635 548 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC004908.3-201ENST00000610248 625 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC104820.1-201ENST00000624183 307 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.01□□□□□ -2.41
LINC00643Q86TS7 AC090625.1-201ENST00000357130 210 ntBASIC0□□□□□ -2.41
LINC00643Q86TS7 MIR1295A-201ENST00000408463 79 ntBASIC0□□□□□ -2.41
LINC00643Q86TS7 MIR1261-201ENST00000408659 82 ntBASIC0□□□□□ -2.41
LINC00643Q86TS7 MTCO1P23-201ENST00000415223 1526 ntBASIC0□□□□□ -2.41
LINC00643Q86TS7 PPP1R11P2-201ENST00000423543 382 ntBASIC0□□□□□ -2.41
LINC00643Q86TS7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC0□□□□□ -2.41
LINC00643Q86TS7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0□□□□□ -2.41
LINC00643Q86TS7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0□□□□□ -2.41
LINC00643Q86TS7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0□□□□□ -2.41
LINC00643Q86TS7 AC105313.1-201ENST00000509121 353 ntBASIC0□□□□□ -2.41
LINC00643Q86TS7 AP000907.2-201ENST00000530827 353 ntBASIC0□□□□□ -2.41
LINC00643Q86TS7 AC022387.2-201ENST00000604050 448 ntBASIC0□□□□□ -2.41
LINC00643Q86TS7 AC112220.2-201ENST00000605513 533 ntBASIC0□□□□□ -2.41
LINC00643Q86TS7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0□□□□□ -2.41
LINC00643Q86TS7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0□□□□□ -2.41
LINC00643Q86TS7 AC080188.3-201ENST00000624842 748 ntBASIC0□□□□□ -2.41
LINC00643Q86TS7 AC233981.2-201ENST00000611524 1614 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 RNU6-942P-201ENST00000363002 107 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 RNA5SP493-201ENST00000364115 91 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 SNORD12-201ENST00000391002 90 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 AL356776.1-201ENST00000406574 447 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 RPL21P111-201ENST00000418453 477 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 AL669831.1-202ENST00000428504 417 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 RPS15AP9-201ENST00000439856 381 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 NDUFAF4P2-201ENST00000445374 520 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 RNA5SP269-201ENST00000459032 137 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 RN7SKP12-201ENST00000516275 143 ntBASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.01□□□□□ -2.41
LINC00643Q86TS7 MIR3169-201ENST00000578032 83 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms