Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SNORA4.3-201ENST00000365564 137 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 RNU6-748P-201ENST00000384648 107 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 RPP40P1-201ENST00000426762 456 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 RNU6-758P-201ENST00000516292 89 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 HSPA8P13-201ENST00000523715 472 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AL160236.1-201ENST00000556317 195 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 HMGN2P15-201ENST00000585707 270 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 HMGB1P51-201ENST00000605166 638 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AL109659.3-201ENST00000624985 950 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AC017104.5-201ENST00000637647 639 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 RNU6-1305P-201ENST00000364353 104 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 NDUFB4P7-201ENST00000423198 363 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 PRPS1P1-201ENST00000445305 876 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AL441985.1-201ENST00000457727 251 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AC006512.1-201ENST00000468816 291 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AC006199.1-201ENST00000548728 219 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AC018618.2-201ENST00000604770 446 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AC068276.1-201ENST00000605793 379 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AC009318.4-201ENST00000620496 486 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 Y_RNA.571-201ENST00000384753 98 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 HMGN2P39-201ENST00000398005 273 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 MRPL35P1-201ENST00000404272 572 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AC103851.1-201ENST00000506833 274 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AC107953.1-201ENST00000522216 297 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CSMD3Q7Z407 AL669831.4-202ENST00000590817 238 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 PRR13P7-201ENST00000605538 430 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 DUSP12P1-201ENST00000612874 516 ntBASIC0.37□□□□□ -2.35
CSMD3Q7Z407 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CSMD3Q7Z407 RNU1-36P-201ENST00000365130 165 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 RNU6-217P-201ENST00000384164 104 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 RNU2-7P-201ENST00000410794 178 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC092628.1-201ENST00000436250 252 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.36□□□□□ -2.35
CSMD3Q7Z407 PTENP1-201ENST00000447117 1215 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC139453.3-201ENST00000493276 369 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 UBL5P1-201ENST00000507979 193 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC090888.1-201ENST00000561335 1141 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC004775.1-201ENST00000607389 753 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AP005229.2-201ENST00000609980 697 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 MIR6130-201ENST00000619419 109 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AL121890.5-201ENST00000620848 304 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 Y_RNA.132-201ENST00000363421 102 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 RNY3-201ENST00000365484 102 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 RNU6-441P-201ENST00000384545 106 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 RNU2-49P-201ENST00000410666 184 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 RPL26P27-201ENST00000414397 437 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.36□□□□□ -2.35
CSMD3Q7Z407 UBE2V2P3-201ENST00000433562 437 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 MTCO1P44-201ENST00000441935 243 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 HSPE1P13-201ENST00000451143 297 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AL163195.1-201ENST00000496941 348 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.36□□□□□ -2.35
CSMD3Q7Z407 IGLVI-20-201ENST00000519296 130 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC005832.3-201ENST00000537929 631 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.36□□□□□ -2.35
CSMD3Q7Z407 LINC00557-201ENST00000563184 1279 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AL359314.1-201ENST00000616913 261 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC068057.2-201ENST00000624047 895 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC083865.1-201ENST00000636634 831 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.36□□□□□ -2.35
CSMD3Q7Z407 SNORD33-201ENST00000362761 85 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 RNU6-270P-201ENST00000364131 105 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 SNORD114-15-201ENST00000364687 72 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 RNU6-968P-201ENST00000384076 107 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 MIR618-201ENST00000385287 98 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AL512844.2-201ENST00000433990 593 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.36□□□□□ -2.35
CSMD3Q7Z407 RNU6-27P-201ENST00000516146 107 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC034114.1-201ENST00000520293 285 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.36□□□□□ -2.35
CSMD3Q7Z407 AL022345.1-201ENST00000607292 135 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 uc_338.14-201ENST00000613162 166 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.36□□□□□ -2.35
CSMD3Q7Z407 MIR95-201ENST00000385072 81 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 MIR29C-201ENST00000385231 88 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 MTCO1P56-201ENST00000401674 224 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 UBE2FP1-201ENST00000416536 447 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AL160275.3-201ENST00000423876 471 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 RSU1P2-202ENST00000437884 485 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 DDX3P2-201ENST00000446138 111 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 MTND1P33-201ENST00000446251 917 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.35□□□□□ -2.35
CSMD3Q7Z407 MTND1P16-201ENST00000465177 898 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 AC027104.1-201ENST00000563702 681 ntBASIC0.35□□□□□ -2.35
CSMD3Q7Z407 BBIP1P1-201ENST00000602999 279 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 437 ms