Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU6-193P-201ENST00000410977 107 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 RNA5SP247-201ENST00000411181 105 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 GPM6BP2-201ENST00000432046 144 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 GPM6BP1-201ENST00000446387 144 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 MTND3P16-201ENST00000452205 344 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 RPL30P5-201ENST00000494923 336 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 RPL38P4-201ENST00000502376 214 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 AC074344.1-201ENST00000512823 224 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 AF235103.2-201ENST00000525753 346 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 uc_338.34-201ENST00000617467 174 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 AP003122.6-201ENST00000623831 495 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 Z99571.1-201ENST00000636677 394 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 AC093010.3-201ENST00000570269 15214 ntBASIC3.64□□□□□ -1.83
KRT28Q7Z3Y7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AC090740.1-201ENST00000623193 2262 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 FAT1P1-201ENST00000406588 507 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 RN7SKP58-201ENST00000411010 305 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AC245054.2-201ENST00000415639 319 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AC245291.1-201ENST00000419501 328 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AL160275.3-201ENST00000423876 471 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 RPL21P41-201ENST00000459863 264 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AC003982.1-202ENST00000469928 248 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 RPL21P99-201ENST00000480369 423 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AC018710.1-201ENST00000506509 158 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 RNA5SP282-201ENST00000516355 108 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AL137161.1-201ENST00000532231 390 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 TRAV28-201ENST00000557548 323 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AC060780.3-201ENST00000589464 80 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AC090115.4-201ENST00000609970 188 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AL390240.1-201ENST00000612950 384 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.63□□□□□ -1.83
KRT28Q7Z3Y7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 Y_RNA.303-201ENST00000364998 94 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 MIR301A-201ENST00000385261 86 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 RNU4-53P-201ENST00000410828 140 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 RPL30P16-201ENST00000419341 429 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 AL512844.2-201ENST00000433990 593 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 Z82210.1-201ENST00000440037 231 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 SCARNA18-201ENST00000459004 134 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 RNA5SP310-201ENST00000459084 116 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 RNU7-180P-201ENST00000459240 63 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 MTCYBP18-201ENST00000501056 747 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 AL355073.2-201ENST00000612106 557 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 U6.42-201ENST00000618440 107 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 CUL1P1-201ENST00000509510 2425 ntBASIC3.62□□□□□ -1.83
KRT28Q7Z3Y7 MIR26A1-201ENST00000362205 77 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 RNA5SP383-201ENST00000362934 120 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 MT-TL1-201ENST00000386347 75 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 RNU6-332P-201ENST00000391193 108 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 Y_RNA.604-201ENST00000410574 102 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 RN7SKP192-201ENST00000411291 327 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 RPL31P12-201ENST00000422587 358 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 AL591704.1-201ENST00000432574 275 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 AL121601.2-201ENST00000438019 707 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 MTND3P10-201ENST00000450967 341 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 RPL23AP11-201ENST00000475260 469 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 AC091885.1-201ENST00000506658 268 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 RNA5SP320-201ENST00000516263 124 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 CASP1P1-201ENST00000526345 212 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 BNIP3P6-201ENST00000549284 499 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 MIR4424-201ENST00000585257 86 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 AC100810.6-201ENST00000638068 285 ntBASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRT28Q7Z3Y7 AL049641.1-201ENST00000441055 1948 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 Y_RNA.86-201ENST00000363020 111 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 Y_RNA.160-201ENST00000363677 92 ntBASIC3.6□□□□□ -1.83
KRT28Q7Z3Y7 Y_RNA.231-201ENST00000364358 102 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms