Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 AC079140.2-201ENST00000506193 142 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 AC006518.2-201ENST00000542513 940 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 MIR4765-201ENST00000585007 77 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 AC079791.1-201ENST00000605356 973 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 NANOGP2-201ENST00000435391 727 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 PGBD4P5-201ENST00000445958 426 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 AC018868.1-201ENST00000491307 315 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 RNA5SP395-201ENST00000516567 118 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 AC015688.2-201ENST00000584523 262 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 AL021879.1-201ENST00000611756 288 ntBASIC0.48□□□□□ -2.33
CCDC141Q6ZP82 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 RNU11-3P-201ENST00000391111 133 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 HMGB1P17-201ENST00000403495 628 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 RNU2-36P-201ENST00000410361 191 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 RNA5SP501-201ENST00000410990 112 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 MED14P1-201ENST00000430517 648 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 RPL26P6-201ENST00000440913 438 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 RPL23AP35-201ENST00000451906 501 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 AP003327.1-201ENST00000529684 127 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 MIR3921-201ENST00000577308 85 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 HMGB1P51-201ENST00000605166 638 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 AC138473.1-201ENST00000605717 526 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 MIR6718-201ENST00000616153 80 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 AC024581.2-201ENST00000619986 252 ntBASIC0.47□□□□□ -2.33
CCDC141Q6ZP82 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 RNU1-124P-201ENST00000363861 145 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 SNORA4.1-201ENST00000364263 144 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 SNORA25B-201ENST00000365507 128 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 AL031577.2-201ENST00000404133 280 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 AL355615.1-201ENST00000406187 641 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 RNU2-47P-201ENST00000410649 186 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 RPS27P16-201ENST00000425758 201 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 AC244023.1-201ENST00000426884 112 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 AP1S2P1-201ENST00000457344 379 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 CYB5AP5-201ENST00000549779 389 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 EEF1B2P4-201ENST00000551398 348 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 AC242498.1-201ENST00000604134 111 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 AC069304.2-201ENST00000605154 435 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 AC243994.1-201ENST00000618627 109 ntBASIC0.46□□□□□ -2.34
CCDC141Q6ZP82 RNU6-884P-201ENST00000363889 107 ntBASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 Y_RNA.280-201ENST00000364765 112 ntBASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 MIR597-201ENST00000384968 97 ntBASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 UBE2V1P4-201ENST00000425374 344 ntBASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 SMURF2P1-201ENST00000514992 481 ntBASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 RNA5SP476-201ENST00000516613 103 ntBASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 AC022616.2-201ENST00000523185 300 ntBASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 AC010900.2-201ENST00000604508 210 ntBASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 AL078604.3-201ENST00000615580 211 ntBASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 AL359314.1-201ENST00000616913 261 ntBASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
CCDC141Q6ZP82 SNORD82-201ENST00000365530 70 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 RNU6-217P-201ENST00000384164 104 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 RNU4-31P-201ENST00000384211 141 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 MIR135A2-201ENST00000384854 100 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 MTCO1P56-201ENST00000401674 224 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 AL591034.2-201ENST00000402839 359 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 RNU2-63P-201ENST00000410792 194 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 MTCO1P23-201ENST00000415223 1526 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 LINC01347-201ENST00000417964 355 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 GTF2IP12-201ENST00000456547 356 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 RNU6-1256P-201ENST00000516539 103 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 AC026271.5-201ENST00000577873 130 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 AC073569.3-201ENST00000619055 682 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 U6.107-201ENST00000637108 79 ntBASIC0.44□□□□□ -2.34
CCDC141Q6ZP82 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CCDC141Q6ZP82 ZNF680P1-201ENST00000436625 1469 ntBASIC0.43□□□□□ -2.34
CCDC141Q6ZP82 SNORD1A-201ENST00000364968 72 ntBASIC0.43□□□□□ -2.34
CCDC141Q6ZP82 BTF3P8-201ENST00000414577 526 ntBASIC0.43□□□□□ -2.34
CCDC141Q6ZP82 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms