Protein–RNA interactions for Protein: Q4LDR2

CTXN3, Cortexin-3, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTXN3Q4LDR2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AC073325.2-201ENST00000339545 159 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 SNORD14B-201ENST00000364533 90 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 RNU6-1303P-201ENST00000364841 107 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 Z98749.2-208ENST00000381646 500 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 MIR10A-201ENST00000385043 110 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 RN7SKP285-201ENST00000410137 318 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 RNU2-49P-201ENST00000410666 184 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AC023141.4-201ENST00000412031 328 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 ATG3P1-201ENST00000419507 911 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AC098831.1-201ENST00000440661 216 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 FGF7P6-202ENST00000451282 293 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 RPS29P26-201ENST00000477483 171 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 RPS27P26-201ENST00000494583 239 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AF213884.2-201ENST00000510417 903 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 LINC00933-203ENST00000559812 219 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AC025281.1-201ENST00000567026 265 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AC010653.1-201ENST00000571108 881 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AC005498.1-201ENST00000592125 465 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 RPL23AP78-201ENST00000599928 470 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 MIR3199-2-201ENST00000636243 86 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 MIR3662-201ENST00000637030 95 ntBASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CTXN3Q4LDR2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 Y_RNA.231-201ENST00000364358 102 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 RNU6-898P-201ENST00000365627 104 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 MIR1289-1-201ENST00000408836 144 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 RNU6-607P-201ENST00000411283 108 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 BX682237.1-201ENST00000415016 335 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AC245291.1-201ENST00000419501 328 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AL139132.1-201ENST00000431587 344 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 RPS12P18-201ENST00000442381 270 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 NFU1P2-201ENST00000448700 469 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 NDUFB1P2-201ENST00000449477 176 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AC006539.3-201ENST00000454258 129 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 BTF3P15-201ENST00000455606 336 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 RN7SL20P-201ENST00000488827 297 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AC091885.1-201ENST00000506658 268 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 MIR892C-201ENST00000516410 77 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AC104027.1-201ENST00000521887 300 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AL118558.2-201ENST00000556294 238 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AL645944.1-201ENST00000603857 493 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 RMST_3.1-201ENST00000611651 109 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AC002553.4-201ENST00000616896 331 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 MIR6852-201ENST00000621699 66 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 AL031601.2-202ENST00000622650 282 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 ZNF519P1-201ENST00000449011 1626 ntBASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.18□□□□□ -1.9
CTXN3Q4LDR2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 SNORA5B-201ENST00000363786 132 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 RNU6-384P-201ENST00000364900 104 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 Y_RNA.378-201ENST00000365652 113 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 Y_RNA.399-201ENST00000383955 105 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 Y_RNA.510-201ENST00000384511 114 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 MIR514A2-201ENST00000385131 88 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 MIR514A3-201ENST00000385132 88 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 PGBD4P6-201ENST00000421501 610 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 ERLEC1P1-201ENST00000433806 578 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 CALM1P1-201ENST00000442082 433 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 HMGN2P10-201ENST00000448085 265 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 AC233279.1-201ENST00000455300 423 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 RNU7-167P-201ENST00000459160 62 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 DYNLL1P5-201ENST00000467158 270 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 RPL21P93-201ENST00000480465 489 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 AC083906.5-201ENST00000503722 328 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 SNORA64.4-201ENST00000516632 81 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 CENPUP1-201ENST00000526649 1202 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 AC021739.1-201ENST00000559631 174 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 LRRC37A5P-203ENST00000580181 585 ntBASIC3.17□□□□□ -1.9
CTXN3Q4LDR2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms