Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RPS29P20-201ENST00000489592 171 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 AC009901.1-201ENST00000506703 541 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP41Q3LFD5 AC025755.1-201ENST00000521306 278 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.03□□□□□ -1.92
USP41Q3LFD5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.03□□□□□ -1.92
USP41Q3LFD5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.03□□□□□ -1.92
USP41Q3LFD5 MIR5583-1-201ENST00000580941 59 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.03□□□□□ -1.92
USP41Q3LFD5 AL627309.6-201ENST00000606857 840 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 AC007014.2-201ENST00000615581 479 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 U6.99-201ENST00000637524 83 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 AP003122.5-201ENST00000527668 3766 ntBASIC3.03□□□□□ -1.92
USP41Q3LFD5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.03□□□□□ -1.92
USP41Q3LFD5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.03□□□□□ -1.92
USP41Q3LFD5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP41Q3LFD5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USP41Q3LFD5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP41Q3LFD5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 RNU6-715P-201ENST00000365204 103 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 U8.9-201ENST00000365667 134 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 RNU6-1179P-201ENST00000384667 107 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 MIR578-201ENST00000384828 96 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 MIR888-201ENST00000401186 77 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 AC007560.1-201ENST00000426912 237 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 RPL26P9-201ENST00000457466 433 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 SNORD109B-201ENST00000458961 67 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 SCARNA18-201ENST00000459004 134 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 SNORD109A-201ENST00000459128 67 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 RNU7-180P-201ENST00000459240 63 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 MTCO3P9-201ENST00000506989 781 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 RNU4-29P-201ENST00000515943 174 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 AC009902.1-201ENST00000519351 183 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 SUB1P1-201ENST00000524415 382 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 BNIP3P6-201ENST00000549284 499 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 AC079600.2-201ENST00000550076 130 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 AL391261.3-201ENST00000557194 520 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 NRBF2P5-201ENST00000603087 788 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 AP000907.4-201ENST00000604143 237 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 AL161629.2-201ENST00000615347 275 ntBASIC3.02□□□□□ -1.93
USP41Q3LFD5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
USP41Q3LFD5 AC010680.1-201ENST00000590024 3590 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USP41Q3LFD5 Y_RNA.89-201ENST00000363031 102 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 Y_RNA.295-201ENST00000364918 102 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 RNU6-658P-201ENST00000384606 106 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 MIR9-1-201ENST00000385198 89 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 AL360182.1-201ENST00000397433 468 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.01□□□□□ -1.93
USP41Q3LFD5 AL590004.2-201ENST00000404787 371 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 MIR1277-201ENST00000408536 78 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 AL592148.1-201ENST00000413568 445 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.01□□□□□ -1.93
USP41Q3LFD5 AC022493.1-201ENST00000492984 337 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
USP41Q3LFD5 AF213884.2-201ENST00000510417 903 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 AC112206.3-201ENST00000514578 389 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 RNU6-572P-201ENST00000516724 80 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 SNORA31.19-201ENST00000517079 126 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 SNORA31.26-201ENST00000517250 137 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.01□□□□□ -1.93
USP41Q3LFD5 MTND4P7-201ENST00000523876 130 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
USP41Q3LFD5 AL137161.1-201ENST00000532231 390 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.01□□□□□ -1.93
USP41Q3LFD5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.01□□□□□ -1.93
USP41Q3LFD5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.01□□□□□ -1.93
USP41Q3LFD5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.01□□□□□ -1.93
USP41Q3LFD5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.01□□□□□ -1.93
USP41Q3LFD5 MTCO3P13-201ENST00000577757 781 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 MIR5692A1-201ENST00000580523 69 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.01□□□□□ -1.93
USP41Q3LFD5 HMGN2P15-201ENST00000585707 270 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 AL355598.1-201ENST00000604169 202 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 uc_338.34-201ENST00000617467 174 ntBASIC3.01□□□□□ -1.93
USP41Q3LFD5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.01□□□□□ -1.93
USP41Q3LFD5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
USP41Q3LFD5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3□□□□□ -1.93
USP41Q3LFD5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.93
USP41Q3LFD5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
USP41Q3LFD5 RNU6-371P-201ENST00000364283 108 ntBASIC3□□□□□ -1.93
USP41Q3LFD5 RNU6-877P-201ENST00000383868 107 ntBASIC3□□□□□ -1.93
USP41Q3LFD5 RNU1-73P-201ENST00000383971 164 ntBASIC3□□□□□ -1.93
USP41Q3LFD5 SNORA75B-201ENST00000384053 137 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms