Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC104763.2-201ENST00000604179 382 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC007619.2-201ENST00000605743 379 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC087045.1-201ENST00000605856 382 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.57□□□□□ -2
SNAI3Q3KNW1 uc_338.34-201ENST00000617467 174 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC005858.4-201ENST00000623191 700 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC112487.2-201ENST00000637950 304 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNAI3Q3KNW1 MTND4P14-201ENST00000435799 1354 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC099654.7-201ENST00000635788 2127 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNAI3Q3KNW1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNAI3Q3KNW1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNAI3Q3KNW1 AL035425.3-201ENST00000564206 4996 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
SNAI3Q3KNW1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 RNU1-105P-201ENST00000363470 161 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 Y_RNA.167-201ENST00000363735 109 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 SNORA71.1-201ENST00000364523 117 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 Y_RNA.356-201ENST00000365475 113 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 MIR767-201ENST00000390228 109 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 RNU6-550P-201ENST00000391057 101 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 SNORA11-201ENST00000408789 128 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 RNU4-46P-201ENST00000410818 138 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 EEF1A1P40-201ENST00000412883 573 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 AL365496.1-201ENST00000426885 215 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 CALM2P2-201ENST00000428512 440 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 NEFMP1-201ENST00000443423 1006 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.56□□□□□ -2
SNAI3Q3KNW1 RPL37P4-201ENST00000448908 268 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.56□□□□□ -2
SNAI3Q3KNW1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.56□□□□□ -2
SNAI3Q3KNW1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.56□□□□□ -2
SNAI3Q3KNW1 AC007547.1-201ENST00000462177 490 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.56□□□□□ -2
SNAI3Q3KNW1 MTCO3P9-201ENST00000506989 781 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 CCDC34P1-201ENST00000507441 517 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.56□□□□□ -2
SNAI3Q3KNW1 BTF3P12-201ENST00000519620 469 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 MTND4P7-201ENST00000523876 130 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 GLYCAM1-201ENST00000546596 285 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 AC012493.2-201ENST00000595083 291 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 AC012468.1-201ENST00000604888 430 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.56□□□□□ -2
SNAI3Q3KNW1 AC012409.4-201ENST00000612923 249 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 MTND1P37-201ENST00000636562 264 ntBASIC2.56□□□□□ -2
SNAI3Q3KNW1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.56□□□□□ -2
SNAI3Q3KNW1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SNAI3Q3KNW1 Y_RNA.100-201ENST00000363141 102 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 RNU4-73P-201ENST00000363164 141 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SNAI3Q3KNW1 SNORA32.2-201ENST00000384049 122 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 RNU6-217P-201ENST00000384164 104 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 RNU6-140P-201ENST00000384566 108 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 RNU2-33P-201ENST00000410344 192 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 AL513331.1-201ENST00000411908 397 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 MTND3P8-201ENST00000412909 339 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 ARL5AP1-201ENST00000418991 388 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 Z96811.1-201ENST00000445880 108 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 RNU7-23P-201ENST00000459465 62 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 RNU6-329P-201ENST00000459618 107 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 RPS20P22-201ENST00000473700 357 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.55□□□□□ -2
SNAI3Q3KNW1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 AC009901.1-201ENST00000506703 541 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 FAM206BP-201ENST00000510179 541 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 RNU6-123P-201ENST00000516163 102 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 RNU7-30P-201ENST00000516835 62 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 RN7SKP256-201ENST00000517201 314 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 RANP3-201ENST00000530970 276 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 AC087241.2-201ENST00000535801 324 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.55□□□□□ -2
SNAI3Q3KNW1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 AC121333.1-201ENST00000567488 2709 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 MIR5583-1-201ENST00000580941 59 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 MIR3944-201ENST00000581277 108 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 AL356055.1-201ENST00000602528 446 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 DPPA3P3-201ENST00000603842 430 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 UCA1.1-201ENST00000620952 75 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 MTND5P42-201ENST00000637720 498 ntBASIC2.55□□□□□ -2
SNAI3Q3KNW1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.55□□□□□ -2
SNAI3Q3KNW1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 AL353743.1-202ENST00000431724 1695 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SNAI3Q3KNW1 FTLP6-201ENST00000355274 422 ntBASIC2.54□□□□□ -2
SNAI3Q3KNW1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms