Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.97□□□□□ -2.09
RFX4Q33E94 AC008250.2-201ENST00000615261 205 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.97□□□□□ -2.09
RFX4Q33E94 PISRT1-201ENST00000626175 531 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
RFX4Q33E94 U3.4-201ENST00000363352 213 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 RNY4P34-201ENST00000364779 95 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 RNU6-169P-201ENST00000365336 107 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
RFX4Q33E94 RNU6-166P-201ENST00000384371 107 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 SNORA24.1-201ENST00000384401 135 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 SNORA40C-201ENST00000391285 128 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 RNU6-1025P-201ENST00000410629 104 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.96□□□□□ -2.1
RFX4Q33E94 AC137499.1-201ENST00000427602 88 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.96□□□□□ -2.1
RFX4Q33E94 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.96□□□□□ -2.1
RFX4Q33E94 AC004383.1-201ENST00000438135 289 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 RPS24P1-201ENST00000438550 371 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AL031667.1-201ENST00000440222 725 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AL118520.1-201ENST00000450770 291 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AC092001.1-201ENST00000453012 261 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 MTCYBP1-201ENST00000454315 1119 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 SNRPGP9-201ENST00000456025 225 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 DYNLL1P5-201ENST00000467158 270 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AC128713.1-201ENST00000471495 306 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AC026801.1-201ENST00000497178 464 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 RNU7-193P-201ENST00000516723 65 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 RNU6-143P-201ENST00000516942 93 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AC026407.1-201ENST00000518369 204 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.96□□□□□ -2.1
RFX4Q33E94 AL157871.3-201ENST00000557231 293 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.96□□□□□ -2.1
RFX4Q33E94 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RFX4Q33E94 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.96□□□□□ -2.1
RFX4Q33E94 AC174048.1-201ENST00000603389 144 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 Z94722.1-201ENST00000604328 474 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AL121992.2-201ENST00000606262 256 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 MIR6134-201ENST00000617606 109 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AC098657.3-201ENST00000620434 263 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 AL031601.2-202ENST00000622650 282 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RFX4Q33E94 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
RFX4Q33E94 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
RFX4Q33E94 CDC27P3-201ENST00000635418 1910 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.95□□□□□ -2.1
RFX4Q33E94 AC073343.1-201ENST00000328239 651 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 SNORD3E-201ENST00000362899 217 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 RNU6-898P-201ENST00000365627 104 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 SNORA20.2-201ENST00000383922 131 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 MIR301A-201ENST00000385261 86 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 SNORA40.3-201ENST00000390964 122 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
RFX4Q33E94 RNU6-248P-201ENST00000410720 107 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.95□□□□□ -2.1
RFX4Q33E94 GAPDHP17-201ENST00000449858 1001 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 FABP5P13-201ENST00000452144 328 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX4Q33E94 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.95□□□□□ -2.1
RFX4Q33E94 AC108078.2-201ENST00000510750 236 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 AC118465.1-201ENST00000513820 1271 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX4Q33E94 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX4Q33E94 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 SNORD19.2-201ENST00000516978 73 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 AC090572.1-201ENST00000519251 160 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 AC007834.2-201ENST00000536310 343 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 AL138976.2-201ENST00000563989 694 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.95□□□□□ -2.1
RFX4Q33E94 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.95□□□□□ -2.1
RFX4Q33E94 MIR1273C-201ENST00000578669 77 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 CLIC4P2-201ENST00000601934 717 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 AC090578.1-201ENST00000604955 591 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 AC126118.1-201ENST00000607744 628 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.95□□□□□ -2.1
RFX4Q33E94 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RFX4Q33E94 AC103710.2-202ENST00000641454 2853 ntBASIC1.95□□□□□ -2.1
RFX4Q33E94 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RFX4Q33E94 AC009487.4-201ENST00000624969 3585 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 FGF7P2-201ENST00000332473 296 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 RNA5SP289-201ENST00000362332 137 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 RNY3P10-201ENST00000384764 102 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AC127391.1-201ENST00000411737 98 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX4Q33E94 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.94□□□□□ -2.1
RFX4Q33E94 ISCA1P6-201ENST00000427740 390 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 MED13P1-201ENST00000428342 171 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.94□□□□□ -2.1
RFX4Q33E94 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.94□□□□□ -2.1
RFX4Q33E94 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX4Q33E94 MTATP6P16-201ENST00000434543 526 ntBASIC1.94□□□□□ -2.1
RFX4Q33E94 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.94□□□□□ -2.1
RFX4Q33E94 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.94□□□□□ -2.1
RFX4Q33E94 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.94□□□□□ -2.1
RFX4Q33E94 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms